| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.A02862.1 |
| Family | GH29 |
| Protein Properties | Length: 411 Molecular Weight: 46476.2 Isoelectric Point: 6.116 |
| Chromosome | Chromosome/Scaffold: 1 Start: 39075911 End: 39077646 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 2 | 296 | 0 |
| KWQQREIIMFLHFGVNTFTGYERGTGHEDPAIFNPVGLDTNQWVSAAVDAGISLMILTAKHHDGFCLWPSKYTDHSVERSRWKDGKGDVVWEFVDAAKAR GVDVGLYLSPWDRHEPRYGHILEYNEYYLAQLQELLTNYGSLREIWFDGFKNSTLNMTYYFTEWFSMVKELQSSINIFSDAGPDVRWVGNEDGTAGTTCW ATINRTSLSIGNASIEGYLNVGDPRGTHYLPAECDVTIRDGWFWHKSESPKKLSKLLQIYYNSVGRNCVLLLNVPPNTTGLLPETDVHTLKELRT | |||
| Full Sequence |
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| Protein Sequence Length: 411 Download |
| LKWQQREIIM FLHFGVNTFT GYERGTGHED PAIFNPVGLD TNQWVSAAVD AGISLMILTA 60 KHHDGFCLWP SKYTDHSVER SRWKDGKGDV VWEFVDAAKA RGVDVGLYLS PWDRHEPRYG 120 HILEYNEYYL AQLQELLTNY GSLREIWFDG FKNSTLNMTY YFTEWFSMVK ELQSSINIFS 180 DAGPDVRWVG NEDGTAGTTC WATINRTSLS IGNASIEGYL NVGDPRGTHY LPAECDVTIR 240 DGWFWHKSES PKKLSKLLQI YYNSVGRNCV LLLNVPPNTT GLLPETDVHT LKELRTALDT 300 IFSVNLAEKC SVKASSQRGG EDGGFGPENV LDSDHLWTYW APVDEDDAQD HWIEMRGADG 360 GLRFNVVRIQ EAVGLGQRIK RHEIYVDGKK VAQGTTVGHK RLHRLKGGVV Q 420 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01120 | Alpha_L_fucos | 3.0e-27 | 34 | 294 | 279 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 5.0e-29 | 10 | 294 | 328 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 2.0e-43 | 1 | 411 | 435 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270630.1 | 0 | 1 | 411 | 24 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270674.1 | 0 | 1 | 411 | 21 | 431 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318264.1 | 0 | 1 | 411 | 42 | 452 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322431.1 | 0 | 1 | 411 | 43 | 453 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510887.1 | 0 | 1 | 406 | 44 | 449 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 1 | 405 | 15 | 427 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 1 | 405 | 15 | 427 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3ues_B | 0 | 1 | 405 | 24 | 449 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3ues_A | 0 | 1 | 405 | 24 | 449 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 3mo4_B | 0 | 1 | 405 | 26 | 451 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX044171 | 293 | 93 | 383 | 0 |
| ES596238 | 291 | 105 | 390 | 0 |
| EY198039 | 285 | 125 | 406 | 0 |
| HS057235 | 197 | 1 | 197 | 0 |
| HE642643 | 289 | 1 | 286 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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