| APIS family ID | APIS006 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Inhibited defense system | RecBCD | |||||||||||||
| CLAN ID | CLAN005 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | Silas et al., 2023 | |||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | PF08281.15 | |||||||||||||
| Phrog | phrog_323 | |||||||||||||
| Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Salmonella; | |||||||||||||
| Gene Location | Start: 7155; End: 7439; Strand: - | |||||||||||||
| Description | Trigger programmed cell death (PCD) by P4 prophage. | |||||||||||||
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
| MRRLNITPAE MESVCGRMVA CRAAEHLGLN INQFYYIAKK LSLKTAFVKP RWSDDEDKRM | 60 |
| QTLISSGYTQ RNVAKILGRS EESVKSRLSR LRKK | 94 |
| Fam ID | Seed protein | Member count | Model | Alignment |
|---|---|---|---|---|
| APIS006 | AXC42625.1 | 37 | HMM model | Member alignment |
| APIS | Contig | Range |
|---|---|---|
| APIS006 | MH370387.1 | 5267 - 9002 |