APIS family ID | APIS018 | |||||||||||||
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Inhibited defense system | restriction-modification (RM) | |||||||||||||
CLAN ID | CLAN011 | |||||||||||||
Seed protein property |
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Phage property |
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PMID/References | PMID:25118281 | |||||||||||||
PDB structures | 3WX4; | |||||||||||||
Pfam domains | ||||||||||||||
Phrog | phrog_3151 | |||||||||||||
Host taxa | d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia coli | |||||||||||||
Gene Location | Start: 161312; End: 161590; Strand: - | |||||||||||||
Description | T4 phage protein Arn (Anti restriction nuclease) was identified as an inhibitor of the restriction enzyme McrBC. |
Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
---|---|---|---|---|---|---|---|---|---|---|---|
NC_000866.4 | 156542 | 159622 | + | NP_049863.1 | 1026 | 109224.62 | 16.0 | 8.7380 | long tail fiber protein distal subunit | phrog_35830 ; phrog_2097 ; phrog_25747 ; phrog_1699 ; phrog_24369 ; phrog_33642 ; phrog_6459 ; phrog_20242 ; phrog_6256 ; phrog_1858 ; phrog_10316 ; phrog_14307 ; phrog_19966 ; phrog_20472 ; phrog_295 ; phrog_8239 ; phrog_3100 ; phrog_36248 ; phrog_12846 ; phrog_523 ; phrog_327 ; phrog_2631 ; phrog_26622 ; phrog_32294 ; phrog_35174 ; phrog_19618 ; phrog_6859 ; phrog_13229 ; phrog_29752 | PF03335.16 ;PF07484.15 ;PF03335.16 ;PF03335.16 ;PF03335.16 ;PF03335.16 ;PF03335.16 ;PF03335.16 |
NC_000866.4 | 159649 | 160200 | + | NP_049864.1 | 183 | 22310.30 | 1.0 | 6.7689 | tail fiber assembly | phrog_105 ; phrog_15280 ; phrog_7290 ; phrog_1807 | |
NC_000866.4 | 160221 | 160877 | + | NP_049865.1 | 218 | 25175.74 | 3.0 | 7.8511 | holin | phrog_34589 ; phrog_860 | PF11031.11 |
NC_000866.4 | 160878 | 161150 | - | NP_049866.1 | 90 | 10590.03 | -1.5 | 5.1881 | anti-sigma factor | phrog_14527 ; phrog_1166 | PF09010.13 |
NC_000866.4 | 161163 | 161315 | - | NP_049867.1 | 50 | 5935.44 | -5.0 | 4.3167 | hypothetical protein | phrog_3762 ; phrog_24016 | |
NC_000866.4 | 161312 | 161590 | - | NP_049868.1 | 92 | 10900.49 | -7.5 | 4.2444 | inhibitor of MrcBC restriction | phrog_3151 | |
NC_000866.4 | 161674 | 161805 | - | NP_049869.1 | 43 | 5172.95 | 3.0 | 8.2824 | hypothetical protein | phrog_6212 ; phrog_4452 | |
NC_000866.4 | 161876 | 162172 | - | NP_049870.1 | 98 | 11365.34 | 2.0 | 8.4659 | hypothetical protein | phrog_1844 ; phrog_27806 | |
NC_000866.4 | 162172 | 162630 | - | NP_049871.1 | 152 | 17836.25 | -4.0 | 4.8930 | hypothetical protein | phrog_839 | |
NC_000866.4 | 162627 | 162833 | - | NP_049872.2 | 68 | 7899.08 | 3.0 | 9.9519 | hypothetical protein | phrog_33982 ; phrog_1594 | |
NC_000866.4 | 162967 | 163602 | - | NP_049873.1 | 211 | 23574.32 | 4.5 | 9.1923 | MotA-like activator of middle period transcription | phrog_1345 | PF09114.13 ;PF09158.13 |
Fam ID | Seed protein | Member count | Model | Alignment | APIS018 | NP_049868.1 | 70 | HMM model | Member alignment |
---|
Member | pident | evalue | bitscore | qcovs | phage | host | SourceDB | Pfam | Phrog |
---|---|---|---|---|---|---|---|---|---|
DQ904452_00249 | 95.652 | 8.04e-57 | 178 | 100% | Escherichia phage RB32 | Escherichia | INPHARED | phrog_3151 | |
IMGVR_UViG_3300006879_000249|3300006879|Ga0079226_100163416 | 97.826 | 3.09e-57 | 179 | 100% | IMGVR | phrog_3151 | |||
IMGVR_UViG_3300010279_000008|3300010279|Ga0129313_100027143 | 96.739 | 5.23e-57 | 178 | 100% | IMGVR | phrog_3151 | |||
IMGVR_UViG_3300045988_132814|3300045988|Ga0495776_001669_165061_165339 | 95.652 | 3.86e-56 | 176 | 100% | IMGVR | phrog_3151 | |||
JX128259_00259 | 95.652 | 1.26e-55 | 175 | 100% | Escherichia phage ECML-134 | Escherichia | INPHARED | phrog_3151 | |
KM607000_00253 | 94.565 | 3.54e-56 | 176 | 100% | Enterobacteria phage RB27 | Enterobacteria | INPHARED | phrog_3151 | |
KX009778_00259 | 94.565 | 1.06e-55 | 175 | 100% | Escherichia phage UFV-AREG1 | Escherichia | INPHARED | phrog_3151 | |
MF001359_00258 | 95.652 | 1.47e-55 | 175 | 100% | Escherichia phage EC121 | Escherichia | INPHARED | phrog_3151 | |
MG781191_00256 | 96.739 | 2.66e-56 | 177 | 100% | Escherichia phage vB_EcoM-fHoEco02 | Escherichia | INPHARED | phrog_3151 | |
MG867727_00258 | 94.565 | 5.88e-55 | 173 | 100% | Escherichia phage vB_EcoM-G28 | Escherichia | INPHARED | phrog_3151 | |
MGV-GENOME-0371733_137 | 96.739 | 5.23e-57 | 178 | 100% | MGV | phrog_3151 | |||
MGV-GENOME-0377341_131 | 96.739 | 4.29e-57 | 179 | 100% | MGV | phrog_3151 | |||
MGV-GENOME-0377451_137 | 95.652 | 2.60e-56 | 177 | 100% | MGV | phrog_3151 | |||
MGV-GENOME-0377569_267 | 95.652 | 3.98e-56 | 176 | 100% | MGV | phrog_3151 | |||
MGV-GENOME-0377588_138 | 94.565 | 1.46e-53 | 170 | 100% | MGV | phrog_3151 | |||
MGV-GENOME-0377602_92 | 94.565 | 3.95e-55 | 174 | 100% | MGV | phrog_3151 | |||
MK327944_00257 | 96.739 | 2.44e-56 | 177 | 100% | Escherichia phage vB_EcoM_G2540-3 | Escherichia | INPHARED | phrog_3151 | |
MK327946_00264 | 95.652 | 2.44e-55 | 174 | 100% | Escherichia phage vB_EcoM_G4507 | Escherichia | INPHARED | phrog_3151 | |
MK373781_00259 | 96.739 | 7.47e-56 | 176 | 100% | Escherichia phage vB_EcoM_KAW1E185 | Escherichia | INPHARED | phrog_3151 | |
MK962752_00263 | 96.739 | 5.07e-57 | 178 | 100% | Shigella phage JK23 | Shigella | INPHARED | phrog_3151 | |
MN781580_00257 | 96.739 | 8.97e-57 | 178 | 100% | Shigella phage KRT47 | Shigella | INPHARED | phrog_3151 | |
MT176425_00258 | 96.739 | 3.24e-56 | 176 | 100% | Citrobacter phage PhiZZ23 | Citrobacter | INPHARED | phrog_3151 | |
MT515756_00090 | 95.652 | 2.26e-56 | 177 | 100% | Yersinia phage PYps55T | Yersinia | INPHARED | phrog_3151 | |
MT682713_00259 | 95.652 | 5.55e-56 | 176 | 100% | Escherichia phage vB_EcoM_Ozark | Escherichia | INPHARED | phrog_3151 | |
MT764206_00089 | 94.565 | 3.43e-55 | 174 | 100% | Escherichia phage JEP6 | Escherichia | INPHARED | phrog_3151 | |
MT884007_00084 | 96.739 | 7.44e-57 | 178 | 100% | Escherichia phage vb_EcoM_bov10K1 | Escherichia | INPHARED | phrog_3151 | |
MT932213_00251 | 96.739 | 2.66e-56 | 177 | 100% | Escherichia phage VEc74 | Escherichia | INPHARED | phrog_3151 | |
MT984581_00254 | 97.727 | 6.25e-55 | 173 | 96% | Escherichia phage T4 | Escherichia | INPHARED | phrog_3151 | |
MW341595_00042 | 93.478 | 2.29e-54 | 172 | 100% | Shigella phage Sfk20 | Shigella | INPHARED | phrog_3151 | |
MW749000_00254 | 94.565 | 4.67e-55 | 173 | 100% | Hafnia phage vB_HpaM_IsaacDaniel | Hafnia | INPHARED | phrog_3151 | |
MW822007_00241 | 93.478 | 1.80e-54 | 172 | 100% | Escherichia phage BF15 | Escherichia | INPHARED | phrog_3151 | |
MZ065353_00136 | 94.565 | 5.39e-55 | 173 | 100% | Escherichia virus KFS-EC3 | Escherichia | INPHARED | phrog_3151 | |
MZ150757_00260 | 94.565 | 1.32e-55 | 175 | 100% | Salmonella phage Lv5cm | Salmonella | INPHARED | phrog_3151 | |
MZ170041_00266 | 96.739 | 2.66e-56 | 177 | 100% | Escherichia phage vB_EcoM_FN | Escherichia | INPHARED | phrog_3151 | |
MZ501096_00090 | 94.565 | 2.39e-55 | 174 | 100% | Escherichia phage Paracelsus | Escherichia | INPHARED | phrog_3151 | |
MZ501098_00087 | 96.739 | 2.00e-56 | 177 | 100% | Escherichia phage PaulHMueller | Escherichia | INPHARED | phrog_3151 | |
MZ501106_00092 | 95.652 | 3.07e-56 | 176 | 100% | Escherichia phage TadeuszReichstein | Escherichia | INPHARED | phrog_3151 | |
MZ726795_00257 | 95.652 | 7.72e-56 | 175 | 100% | Escherichia phage vB_EcoM_ASO78A | Escherichia | INPHARED | phrog_3151 | |
NP_049868.1 | 100.000 | 1.78e-65 | 183 | 100% | T4 of E. coli | Escherichia coli | NCBI | phrog_3151 | |
OK018184_00270 | 93.478 | 1.31e-53 | 170 | 100% | Shigella phage CT01 | Shigella | INPHARED | phrog_3151 | |
OK148441_00116 | 95.652 | 2.02e-56 | 177 | 100% | Escherichia phage MLP2 | Escherichia | INPHARED | phrog_3151 | |
OL615012_00253 | 95.652 | 1.11e-55 | 175 | 100% | Shigella phage vB_SboM_Phaginator | Shigella | INPHARED | phrog_3151 | |
OL656107_00257 | 95.652 | 1.96e-55 | 174 | 100% | Salmonella phage UAB_60 | Salmonella | INPHARED | phrog_3151 | |
OL770073_00009 | 95.652 | 2.94e-56 | 176 | 100% | Escherichia phage vB_EcoM-RPN226 | Escherichia | INPHARED | phrog_3151 | |
OL956808_00262 | 95.652 | 2.55e-56 | 177 | 100% | Escherichia phage vB_EcoM-S1P5QW | Escherichia | INPHARED | phrog_3151 | |
OL960581_00252 | 94.565 | 7.17e-55 | 173 | 100% | Escherichia phage vB_EcoM_SA20RB | Escherichia | INPHARED | phrog_3151 | |
OM135583_00249 | 94.565 | 3.83e-55 | 174 | 100% | Escherichia phage EP01 | Escherichia | INPHARED | phrog_3151 | |
OM339528_00019 | 96.739 | 1.50e-56 | 177 | 100% | Enterobacteria phage SV76 | Enterobacteria | INPHARED | phrog_3151 | |
ON528736_00097 | 95.652 | 1.34e-55 | 175 | 100% | Shigella phage ESh26 | Shigella | INPHARED | phrog_3151 | |
ON528738_00009 | 95.652 | 2.52e-56 | 177 | 100% | Shigella phage ESh28 | Shigella | INPHARED | phrog_3151 | |
ON528739_00180 | 95.652 | 6.91e-56 | 176 | 100% | Shigella phage ESh29 | Shigella | INPHARED | phrog_3151 | |
ON528745_00259 | 96.739 | 2.00e-56 | 177 | 100% | Shigella phage ESH35 | Shigella | INPHARED | phrog_3151 | |
ON528746_00271 | 94.565 | 4.09e-55 | 174 | 100% | Shigella phage ESh36 | Shigella | INPHARED | phrog_3151 | |
ON720975_00212 | 92.391 | 1.89e-52 | 167 | 100% | Salmonella phage GRNsp7 | Salmonella | INPHARED | phrog_3151 | |
OP172785_00164 | 95.652 | 2.23e-56 | 177 | 100% | Escherichia phage ECO07P2 | Escherichia | INPHARED | phrog_3151 | |
OP172786_00268 | 93.478 | 4.53e-54 | 171 | 100% | Escherichia phage ECO07P3 | Escherichia | INPHARED | phrog_3151 | |
OP555982_00257 | 96.739 | 1.26e-56 | 177 | 100% | Escherichia phage vB_EcoM-UFV11 | Escherichia | INPHARED | phrog_3151 | |
OP856590_00253 | 92.391 | 1.12e-52 | 167 | 100% | Escherichia phage Ec_MI-02 | Escherichia | INPHARED | phrog_3151 | |
OP870144_00256 | 93.478 | 6.78e-55 | 173 | 100% | Escherichia phage vB_Eco_F25 | Escherichia | INPHARED | phrog_3151 | |
OQ067375_00090 | 96.739 | 5.07e-57 | 178 | 100% | Escherichia phage a48 | Escherichia | INPHARED | phrog_3151 | |
OQ067376_00087 | 96.739 | 1.33e-56 | 177 | 100% | Escherichia phage a51 | Escherichia | INPHARED | phrog_3151 | |
OQ174500_00268 | 96.739 | 2.63e-56 | 177 | 100% | Escherichia phage REP1 | Escherichia | INPHARED | phrog_3151 | |
OQ174502_00099 | 96.739 | 5.07e-57 | 178 | 100% | Escherichia phage REP3 | Escherichia | INPHARED | phrog_3151 | |
OQ174503_00073 | 95.652 | 1.17e-55 | 175 | 100% | Escherichia phage REP4 | Escherichia | INPHARED | phrog_3151 | |
OQ349392_00021 | 95.652 | 5.99e-56 | 176 | 100% | Escherichia phage KIT06 | Escherichia | INPHARED | phrog_3151 | |
OQ466432_00138 | 96.739 | 4.16e-57 | 179 | 100% | Escherichia phage ADUt | Escherichia | INPHARED | phrog_3151 | |
OQ599309_00260 | 97.826 | 2.99e-57 | 179 | 100% | Escherichia phage 107 | Escherichia | INPHARED | phrog_3151 | |
OQ721911_00259 | 94.565 | 1.42e-53 | 170 | 100% | Escherichia phage vB_VIPECOOM03 | Escherichia | INPHARED | phrog_3151 | |
uvig_249051_55 | 90.217 | 1.48e-51 | 164 | 100% | GPD | phrog_3151 | |||
uvig_585812_38 | 96.739 | 1.57e-56 | 177 | 100% | GPD | phrog_3151 |
APIS | Contig | Range |
---|---|---|
APIS018 | NC_000866.4 | 156542 - 163602 |