Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0029 enzyme activity assay arabinogalactan Bifidobacterium longum 30564851
Degradative enzymes for type II arabinogalactan side chains in Bifidobacterium longum subsp. longum. Appl Microbiol Biotechnol. 2019 Feb;103(3):1299-1310. doi: 10.1007/s00253-018-9566-4. Epub 2018 Dec 18.
2019 Feb degradation 24 8 GH43_24, GH43, CBM13, GH30, GH30_5, GH146, GH43_22, GH43, GH43_34, GH43_22, GH43, GH43_26, GH43_27, GH43, GH43_22, GH43_22
PUL0128 RT-PCR, enzyme activity assay hemicellulose Bifidobacterium longum subsp. longum JCM 1217 30635377
Two Novel alpha-l-Arabinofuranosidases from Bifidobacterium longum subsp. longum Belonging to Glycoside Hydrolase Family 43 Cooperatively Degrade Arabinan. Appl Environ Microbiol. 2019 Mar 6;85(6). pii: AEM.02582-18. doi: 10.1128/AEM.02582-18. Print 2019 Mar 15.
2019 Mar 15 degradation 24 8 GH43, GH43_24, GH30_5, GH30, CBM13, GH146, GH43, GH43_34, GH43_22, GH43, GH43_22, GH43_26, GH43_27, GH43, GH43_22, GH43_22
PUL0295 gene trait matching exercise arabinan Bifidobacterium longum 29310579
Gene-trait matching across the Bifidobacterium longum pan-genome reveals considerable diversity in carbohydrate catabolism among human infant strains. BMC Genomics. 2018 Jan 8;19(1):33. doi: 10.1186/s12864-017-4388-9.
2018 Jan 8 degradation 9 5 GH43_22, GH43_34, GH43, GH43_22, GH43_26, GH43, GH43_27, GH43, GH43_22, GH43, GH43_22
PUL0300 gene trait matching exercise arabinoxylan Bifidobacterium longum 29310579
Gene-trait matching across the Bifidobacterium longum pan-genome reveals considerable diversity in carbohydrate catabolism among human infant strains. BMC Genomics. 2018 Jan 8;19(1):33. doi: 10.1186/s12864-017-4388-9.
2018 Jan 8 degradation 14 5 GH43_26, GH43, GH43_27, GH43, GH43_4, GH43_4, GH51