| Basic Information | |
|---|---|
| Species | Picea abies |
| Cazyme ID | MA_158766g0100 |
| Family | GH23 |
| Protein Properties | Length: 231 Molecular Weight: 24604.8 Isoelectric Point: 7.1625 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH23 | 33 | 151 | 2.1e-29 |
| QFVSEAAERFAIPAAWIHAVMRVESHGNVKAVSPKGAVGLMQIMPATYAELRERYALGGDPFDPHDNIVAGAAYLREMHDRFGTSGFVAAYNVGPTRYED HLATGRPLPDETRNYVASL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 231 Download |
| MIVTASLVVL TPFTARCETA SARVADAVAP WSQFVSEAAE RFAIPAAWIH AVMRVESHGN 60 VKAVSPKGAV GLMQIMPATY AELRERYALG GDPFDPHDNI VAGAAYLREM HDRFGTSGFV 120 AAYNVGPTRY EDHLATGRPL PDETRNYVAS LAPLLSDAQT GDNAIAAGEP NTWRGASLFV 180 SRSQRKSSDT RMSFTPQSSP VGHDRGAVDL SALTPLPGGL FVKQAPTPGK P 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11671 | mltC | 5.0e-11 | 34 | 107 | 80 | + murein transglycosylase C; Provisional | ||
| PRK11619 | PRK11619 | 2.0e-15 | 31 | 148 | 136 | + lytic murein transglycosylase; Provisional | ||
| COG0741 | MltE | 6.0e-21 | 18 | 148 | 152 | + Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis, outer membrane] | ||
| pfam01464 | SLT | 1.0e-26 | 37 | 127 | 94 | + Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. | ||
| cd00254 | LT_GEWL | 4.0e-29 | 47 | 151 | 109 | + Lytic Transglycosylase (LT) and Goose Egg White Lysozyme (GEWL) domain. Members include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as, the eukaryotic "goose-type" lysozymes (GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | YP_001243201.1 | 0 | 35 | 222 | 1 | 188 | putative soluble lytic murein transglycosylase precursor [Bradyrhizobium sp. BTAi1] |
| RefSeq | YP_001685447.1 | 0 | 30 | 225 | 108 | 304 | lytic transglycosylase catalytic [Caulobacter sp. K31] |
| RefSeq | YP_533750.1 | 0 | 18 | 225 | 92 | 296 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisB18] |
| RefSeq | YP_782935.1 | 0 | 19 | 225 | 93 | 296 | lytic transglycosylase, catalytic [Rhodopseudomonas palustris BisA53] |
| RefSeq | ZP_00957081.1 | 0 | 9 | 209 | 13 | 215 | probable transglycosylase [Oceanicaulis alexandrii HTCC2633] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qte_A | 0.0000000001 | 44 | 151 | 466 | 591 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1qsa_A | 0.0000000001 | 44 | 151 | 466 | 591 | A Chain A, Crystal Structure Of The 70 Kda Soluble Lytic Transglycosylase Slt70 From Escherichia Coli At 1.65 Angstroms Resolution |
| PDB | 1sly_A | 0.000000001 | 44 | 151 | 466 | 591 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 4hjv_E | 0.0001 | 31 | 107 | 39 | 121 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| PDB | 4hjv_D | 0.0001 | 31 | 107 | 39 | 121 | A Chain A, Complex Of The 70-Kda Soluble Lytic Transglycosylase With Bulgecin A |
| Signal Peptide | |||||
|---|---|---|---|---|---|
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| Cleavage Site | |||||
| 0 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FE522940 | 49 | 31 | 79 | 0.000006 |
| EH222229 | 109 | 26 | 133 | 0.00002 |
| HO351281 | 107 | 7 | 107 | 0.008 |
| HO599648 | 83 | 31 | 107 | 0.012 |
| FG600358 | 70 | 94 | 151 | 0.036 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Picea abies | MA_158760g0070 | MA_159146g0030 | MA_159036g0330 | ||
| Ricinus communis | 28599.m000063 | 30333.m000034 | 30692.m000027 | 33357.m000019 | |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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