Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30076.m004575 |
Family | CBM43 |
Protein Properties | Length: 165 Molecular Weight: 18251.9 Isoelectric Point: 8.2696 |
Chromosome | Chromosome/Scaffold: 30076 Start: 893407 End: 894221 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 52 | 129 | 4.9e-27 |
WCIAKPNTNTLKLSRNIEFSCRQKGVDCSPIQPGGSCFRPETTISHASFAMNLFYKAAGKHSWDCHFNGTGIAVAQDP |
Full Sequence |
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Protein Sequence Length: 165 Download |
MGVSRHPLVY LSLAFALLLY CAVCAESRIQ GRDQQPWANT LQQTANDGHG MWCIAKPNTN 60 TLKLSRNIEF SCRQKGVDCS PIQPGGSCFR PETTISHASF AMNLFYKAAG KHSWDCHFNG 120 TGIAVAQDPC KFSLRPWCTL VWQLLALVSI RCEGRAWDDN TGVSA |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-15 | 52 | 123 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-26 | 52 | 132 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB64039.1 | 5e-23 | 36 | 134 | 18 | 115 | putative beta-1,3-glucanase, C terminal fragment [Arabidopsis thaliana] |
RefSeq | NP_001151529.1 | 1e-23 | 52 | 132 | 365 | 449 | LOC100285163 [Zea mays] |
RefSeq | XP_002273170.1 | 2e-39 | 1 | 129 | 1 | 123 | PREDICTED: similar to At2g43670 [Vitis vinifera] |
RefSeq | XP_002320265.1 | 9e-38 | 1 | 129 | 1 | 125 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515203.1 | 0 | 1 | 165 | 1 | 165 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-22 | 50 | 129 | 11 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |