Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G326600.1 |
Family | CBM43 |
Protein Properties | Length: 178 Molecular Weight: 18163.3 Isoelectric Point: 4.3671 |
Chromosome | Chromosome/Scaffold: 09 Start: 32630406 End: 32631956 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 99 | 9.7e-31 |
CLCNDGVGDQALQTTLDYACGNGADCSAIQQNGACYNPNTVKDHCNYAVNSYFQNKGQVTGSCDFAGTASVSANPPTN |
Full Sequence |
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Protein Sequence Length: 178 Download |
MAPLVCLVLF LAMTGHSSAT YCLCNDGVGD QALQTTLDYA CGNGADCSAI QQNGACYNPN 60 TVKDHCNYAV NSYFQNKGQV TGSCDFAGTA SVSANPPTNI PSTCTYPSSS TGTTPATTPT 120 TAGTPTSLGG GTGTAFSPTG TTTGINEPNH AVALFTSINN ILFTFFITLW IVMQGCL* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-22 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-32 | 20 | 99 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19899.1 | 0 | 1 | 116 | 1 | 117 | unknown [Glycine max] |
EMBL | CAN73948.1 | 0 | 1 | 113 | 1 | 113 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27282.1 | 0 | 1 | 110 | 1 | 110 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002311337.1 | 0 | 1 | 170 | 1 | 183 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316090.1 | 0 | 1 | 111 | 1 | 111 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-17 | 14 | 110 | 6 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |