Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna22973.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 126 Molecular Weight: 13919.8 Isoelectric Point: 4.723 |
Chromosome | Chromosome/Scaffold: 4 Start: 20928539 End: 20929150 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 44 | 124 | 6.2e-25 |
WCIAKPSTSDAQLEMNVQYVCQQGYYKISCSVIQPGGSCYIPSNKVSSASMVMNLFFQQDGQTANACYFNGSGLLVYENPS |
Full Sequence |
---|
Protein Sequence Length: 126 Download |
MSAMLKLSFV FFVLTIALFE CFTTSTEARE VKNENGREAN DRKWCIAKPS TSDAQLEMNV 60 QYVCQQGYYK ISCSVIQPGG SCYIPSNKVS SASMVMNLFF QQDGQTANAC YFNGSGLLVY 120 ENPSE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 43 | 116 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-25 | 43 | 124 | 82 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-17 | 44 | 124 | 13 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |