Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10024804m |
Family | CBM43 |
Protein Properties | Length: 136 Molecular Weight: 15522.7 Isoelectric Point: 7.9002 |
Chromosome | Chromosome/Scaffold: 4 Start: 13312625 End: 13313330 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 49 | 129 | 3.4e-30 |
WCVAKPSTSNDKLQENIKFACSKIDCQSISNGSACYSPDSIISRASVAMNLYYQSQGRQYWYCNFEGSGFIALTDPSYGNC |
Full Sequence |
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Protein Sequence Length: 136 Download |
MAKAQICICF IIFFYLWSVL YNQFFFFFFH VFLTKGNCME VNETSSGSWC VAKPSTSNDK 60 LQENIKFACS KIDCQSISNG SACYSPDSII SRASVAMNLY YQSQGRQYWY CNFEGSGFIA 120 LTDPSYGNCI YQFRK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-16 | 48 | 117 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-31 | 48 | 131 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB64039.1 | 0 | 1 | 125 | 1 | 111 | putative beta-1,3-glucanase, C terminal fragment [Arabidopsis thaliana] |
GenBank | AAT41831.1 | 0 | 4 | 135 | 3 | 120 | At2g43670 [Arabidopsis thaliana] |
RefSeq | NP_177973.4 | 1e-36 | 1 | 132 | 1 | 115 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_181895.2 | 0 | 1 | 135 | 1 | 121 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002528491.1 | 2e-33 | 27 | 131 | 12 | 116 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-23 | 45 | 129 | 9 | 94 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |