Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G044300.1 |
Family | CBM43 |
Protein Properties | Length: 116 Molecular Weight: 12524.6 Isoelectric Point: 8.2762 |
Chromosome | Chromosome/Scaffold: 02 Start: 3658714 End: 3659862 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 32 | 112 | 3.9e-30 |
WCVAKPSSDQATLLANINFACSQVDCRVMQKGCPCFSPDNLMNHASIAMNLYYQAKGRNKWNCDFRGSGLVVITNPSYADC |
Full Sequence |
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Protein Sequence Length: 116 Download |
MAKVAAALSL SLLIFSFIPG GTLMMVNGQK SWCVAKPSSD QATLLANINF ACSQVDCRVM 60 QKGCPCFSPD NLMNHASIAM NLYYQAKGRN KWNCDFRGSG LVVITNPSYA DCIYD* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 31 | 100 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-32 | 31 | 114 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ86001.1 | 0 | 20 | 114 | 18 | 112 | unknown [Medicago truncatula] |
RefSeq | XP_002285661.1 | 0 | 18 | 114 | 17 | 113 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300444.1 | 0 | 1 | 114 | 1 | 114 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332529.1 | 0 | 7 | 114 | 12 | 119 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528491.1 | 0 | 1 | 114 | 1 | 116 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-24 | 31 | 114 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |