Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si014645m |
Family | CBM43 |
Protein Properties | Length: 130 Molecular Weight: 13549.3 Isoelectric Point: 7.9679 |
Chromosome | Chromosome/Scaffold: 6 Start: 6541023 End: 6541902 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 46 | 127 | 2.5e-31 |
WCVAKPSSQVAALQDNLDFACSESDCGAIQGTGGCTRPDSLLSRASVAMNAYYQARGRNSWNCFFNGTGLITITDPSLGTCK |
Full Sequence |
---|
Protein Sequence Length: 130 Download |
MASSNVTLLA FCVALTLSVL CNDASASAEA VAQPLRQSHR KASKTWCVAK PSSQVAALQD 60 NLDFACSESD CGAIQGTGGC TRPDSLLSRA SVAMNAYYQA RGRNSWNCFF NGTGLITITD 120 PSLGTCKYA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-16 | 45 | 114 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-31 | 45 | 128 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84562.1 | 0 | 1 | 129 | 1 | 121 | unknown [Zea mays] |
GenBank | ACG25091.1 | 0 | 1 | 129 | 1 | 122 | glucan endo-1,3-beta-glucosidase precursor [Zea mays] |
GenBank | EAZ05508.1 | 4.2039e-45 | 39 | 129 | 62 | 155 | hypothetical protein OsI_27724 [Oryza sativa Indica Group] |
RefSeq | NP_001141170.1 | 0 | 1 | 129 | 1 | 122 | hypothetical protein LOC100273256 [Zea mays] |
RefSeq | XP_002443816.1 | 0 | 1 | 129 | 1 | 121 | hypothetical protein SORBIDRAFT_07g002710 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-22 | 41 | 128 | 8 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |