| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma19g30460.1 |
| Family | GH51 |
| Protein Properties | Length: 647 Molecular Weight: 72067.2 Isoelectric Point: 4.9385 |
| Chromosome | Chromosome/Scaffold: 19 Start: 38067217 End: 38073754 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 170 | 641 | 0 |
| DVIKVASSRRHVYGDGKWKRVETIVEAKTTNHYSSLQITTTREGSYLLDQVSVMPLDTYMGHGFRNDLFQMVADLKPKFLRFPGGCYVEGNYLRNRFQWK DTIGPWEERPGHLGDVWNYWSDDGIGFFEYLLLAEDLGALPIWVFNAGFGLNDEIDTSSIESYVQDALDGIEFARGSPTSQWGSVRAAMGHPTPFDLRYV AVGNENCWQTYFNYQGNYLKFYEAIKAAYPDIQIISNCDASRKPLNHPADLFDFHTYPSSNDMFSLFTKFDNTSRSGPKAFVSEYAVKSDAANGNLLAAV AEAAFLIGLEKNSDIVEMVSYAPLFLNINDKRWIPDAIVFDSYQVYGTPSYWVQKLFIESSGATFIDSTLSTTSSNKLAASVIIWQDSSDKKNYLRIKAV NFGAAAESLDIDLSGLDSNVQQYGSTITVLTSTNVMDENSFLEPKKVVPQTSPLEIDDKHLIVLLPSYSVIS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 647 Download |
| MAYCSLKVLF GVVLYAFAFQ HCYADANSTL IVNAASNNAT ARQIPNTFLG VFVEEINHAG 60 AGGLWAELVI NRGFEAGGPN NALNVYNWSI IGDESSISVS ISRTSCFERN KAALQMEVYC 120 GAHKPCPYGV GISNPGYWGM NIEQGKRYKV VYHVKSERKF DFQLSFTGVD VIKVASSRRH 180 VYGDGKWKRV ETIVEAKTTN HYSSLQITTT REGSYLLDQV SVMPLDTYMG HGFRNDLFQM 240 VADLKPKFLR FPGGCYVEGN YLRNRFQWKD TIGPWEERPG HLGDVWNYWS DDGIGFFEYL 300 LLAEDLGALP IWVFNAGFGL NDEIDTSSIE SYVQDALDGI EFARGSPTSQ WGSVRAAMGH 360 PTPFDLRYVA VGNENCWQTY FNYQGNYLKF YEAIKAAYPD IQIISNCDAS RKPLNHPADL 420 FDFHTYPSSN DMFSLFTKFD NTSRSGPKAF VSEYAVKSDA ANGNLLAAVA EAAFLIGLEK 480 NSDIVEMVSY APLFLNINDK RWIPDAIVFD SYQVYGTPSY WVQKLFIESS GATFIDSTLS 540 TTSSNKLAAS VIIWQDSSDK KNYLRIKAVN FGAAAESLDI DLSGLDSNVQ QYGSTITVLT 600 STNVMDENSF LEPKKVVPQT SPLEIDDKHL IVLLPSYSVI SLDFLI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 1.0e-32 | 232 | 643 | 482 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 1.0e-41 | 452 | 638 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-47 | 452 | 638 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK50089.1 | 0 | 1 | 645 | 1 | 656 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | ABV08815.1 | 0 | 22 | 646 | 16 | 646 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| RefSeq | NP_187685.1 | 0 | 1 | 645 | 1 | 656 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | XP_002307940.1 | 0 | 2 | 645 | 6 | 651 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 24 | 645 | 36 | 659 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vrk_C | 3e-20 | 232 | 644 | 51 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_B | 3e-20 | 232 | 644 | 51 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_A | 3e-20 | 232 | 644 | 51 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 4atw_F | 5e-20 | 231 | 643 | 47 | 482 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 5e-20 | 231 | 643 | 47 | 482 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
