| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb02g043530.1 |
| Family | GH51 |
| Protein Properties | Length: 667 Molecular Weight: 72989.5 Isoelectric Point: 6.9335 |
| Chromosome | Chromosome/Scaffold: 2 Start: 77334150 End: 77339015 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 225 | 538 | 0 |
| SGVVWLDQVSVMPMDTYMGHGFRKDLASMLANLKPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFLQLAEDLGASPV WVVNDGASLNEEVSTKTIASLVKDVVNGIEFARGGPKTTWGSVRASMGHPESFKLDYVSIGNQECWMLYYRGNYQKFYSAIKSAYPDINIISSCDRPTIS PSNPADLYDVHVYTSLTNMFSKTSMFDNTPRGAPKAIVSEYAVTGNDAGKGTLVAALAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSW QHYGCPNYWMLHFF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 667 Download |
| MGVQRANGAS LLRALVVVCA LCWALSSRCA EGQNSNGQLS VNASPQNARK IPDKMFGIFF 60 EEINHAGAGG LWAELVSNRG FEAGGPNTPS NIDPWLIIGD ESSIIVGTDR TSCFERNPVA 120 LRMEVLCASK KTNACPSGGV GVYNPGYWGM NIEKGKVYKV SLHIRSSDTV SLTVSLTSSD 180 GLQKLAAHTI TGSKKTFAKW TKIEFHLRSN QNNTNSRLQL TTSKSGVVWL DQVSVMPMDT 240 YMGHGFRKDL ASMLANLKPQ FLKFPGGNYA MGNYLRNAFR WSETVGPWEE RPGHFNDAWG 300 YWTDDGLGFF EFLQLAEDLG ASPVWVVNDG ASLNEEVSTK TIASLVKDVV NGIEFARGGP 360 KTTWGSVRAS MGHPESFKLD YVSIGNQECW MLYYRGNYQK FYSAIKSAYP DINIISSCDR 420 PTISPSNPAD LYDVHVYTSL TNMFSKTSMF DNTPRGAPKA IVSEYAVTGN DAGKGTLVAA 480 LAEAAFLIGL ERNSDVVEMA SCAPLFVNDN DRRWSPDAIV FNSWQHYGCP NYWMLHFFKE 540 SSGATLHPTA IQISNYDQLL ASAITWQNAK DRSTYLRIKV VNFGNQAVDL NISIAELPTG 600 IKKSGSKQMV LTSSSPLDEN SFQQPEKVVP VLSPMVNVGQ QMGASVGPYS LTSFDLLLEP 660 SKHDSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 9.0e-5 | 476 | 650 | 190 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 6.0e-26 | 245 | 387 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-39 | 463 | 650 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 8.0e-50 | 463 | 650 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF95656.1 | 0 | 1 | 659 | 1 | 658 | Alpha-L-arabinofuranosidase C-terminus family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACR35485.1 | 0 | 1 | 666 | 1 | 663 | unknown [Zea mays] |
| DDBJ | BAC10349.1 | 0 | 1 | 666 | 1 | 664 | putative arabinoxylan narabinofuranohydrolase isoenzyme AXAH-I [Oryza sativa Japonica Group] |
| GenBank | EEE58961.1 | 0 | 1 | 659 | 1 | 662 | hypothetical protein OsJ_10647 [Oryza sativa Japonica Group] |
| RefSeq | XP_002463418.1 | 0 | 1 | 666 | 1 | 666 | hypothetical protein SORBIDRAFT_02g043530 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 0.000000000000001 | 245 | 659 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 0.000000000000001 | 245 | 659 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 0.000000000000001 | 245 | 659 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 0.000000000000001 | 245 | 659 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 0.000000000000001 | 245 | 659 | 48 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
