| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G225800.3 |
| Family | GH51 |
| Protein Properties | Length: 674 Molecular Weight: 74357.6 Isoelectric Point: 4.8708 |
| Chromosome | Chromosome/Scaffold: 02 Start: 58166179 End: 58176525 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 219 | 654 | 0 |
| TTSKNGVVWFDQVSAMPLDTYKGHGFRNELAEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLG ALPIWVFNNGISHNDQVDTSSVLPFVQALDGIEFARGDASSTWGSVRAAMGHPEPFDLKYVAIGNEDCGKKNYRGNYLKFYDAIKRTYPDIKIITNCDGS SLPLDHPTDLYDFHVYTSANNLFSMSHKFDRTTRQGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGLEKNSDVVHMASYAPLFVNSNDRRWNPDAIVF NSFQVYGTPSYWVQRFFTESSGATLLNATLQKDSSNSLVASAITWKNSEDGQTYIRIKVVNFGSNSVNLQISVDGLDPNSVKLSGSTKTTLTSANLMDEN SFKEPKKVAPNQTLLEDAQEMSALLRPHSFTSFDLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 674 Download |
| MGYCKAPCVF LLCLFISFCL PRQLLADEVD KNLTAQLFID ASEQSSRPIP QTLFGIFFEE 60 INHAGAGGLW AELVSNRGFE AGGANIPSNI DPWSIIGDES SIIVSTDRSS CFERNKVALK 120 MEVLCNTDGT HICPSGGVGI YNPGFWGMNI EQGKSYKIVF YVRSTGAIDI SVSFTSSDGL 180 QTLSSTNIKA SASDVSNWTK MEVLLEAKET NHNSRLQLTT SKNGVVWFDQ VSAMPLDTYK 240 GHGFRNELAE MLADIKPRFI RFPGGCFVEG EWLRNAFRWK ASVGPWEERP GHFGDVWMYW 300 TDDGLGYFEF LQLAEDLGAL PIWVFNNGIS HNDQVDTSSV LPFVQALDGI EFARGDASST 360 WGSVRAAMGH PEPFDLKYVA IGNEDCGKKN YRGNYLKFYD AIKRTYPDIK IITNCDGSSL 420 PLDHPTDLYD FHVYTSANNL FSMSHKFDRT TRQGPKAFVS EYAVTGKDAG TGSLLAALAE 480 AAFLIGLEKN SDVVHMASYA PLFVNSNDRR WNPDAIVFNS FQVYGTPSYW VQRFFTESSG 540 ATLLNATLQK DSSNSLVASA ITWKNSEDGQ TYIRIKVVNF GSNSVNLQIS VDGLDPNSVK 600 LSGSTKTTLT SANLMDENSF KEPKKVAPNQ TLLEDAQEMS ALLRPHSFTS FDLLKESVSL 660 RITEDDSSLV SSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 9.0e-29 | 243 | 389 | 152 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-29 | 488 | 647 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-35 | 488 | 647 | 166 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF22680.3 | 0 | 19 | 673 | 18 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 19 | 673 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 1 | 673 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 1 | 673 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 26 | 673 | 31 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 7e-19 | 243 | 653 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 7e-19 | 243 | 653 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 7e-19 | 243 | 653 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 7e-19 | 243 | 653 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 7e-19 | 243 | 653 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
