| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g088410.1 |
| Family | GH51 |
| Protein Properties | Length: 673 Molecular Weight: 74010.4 Isoelectric Point: 5.1556 |
| Chromosome | Chromosome/Scaffold: 7 Start: 27231122 End: 27236570 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 207 | 655 | 0 |
| TNPNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRSDLLQMLVDLKPSFIRFPGGCFVEGDYLRNAFRWKAAVGPWEERPGHFGDVWKYWTDDGLGYYE FLQLSEDLGALPIWVFNNGVSHNDEVDTSAVLPFVQEALDGLEFARGDPTSKWGSMRAAMGHPEPFNLKYVAVGNEDCGKKNYRGNYLRFYDAIRRAYPD IQIISNCDGSSRPLDHPADMYDYHIYTNANDMFSRSTTFNRVTRSGPKAFVSEYAVTGNDAGQGSLLAALAEAGFLIGLEKNSDIVHMASYAPLFVNAND RRWNPDAIVFNSFQLYGTPSYWMQLFFSESNGATLLNSSLQTTASNSLVASAITWQNSVDKKNYIRIKAVNFGTSAVNLKISFNGLDPNSLQSSGSTKTV LTSTNLMDENSFSQPKKVIPIQSLLQSVGKDMNVIVPPHSFTSFDLLKE | |||
| Full Sequence |
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| Protein Sequence Length: 673 Download |
| MGFSKDSCCV FMLQLLIVVY LVVQCFDVQV QADLNATLVV DASQASGRRI PETLFGIFFE 60 EINHAGAGGL WAELVSNRGF EAGGPNIPSN IDPWSIIGNA TYINVETDRT SCFERNKVAL 120 RLEVLCDGTC PTDGVGVYNP GFWGMNIEQG KKYKVVFYAR STGPLNLKVS LTGSNGVGSL 180 ASTVITGSAS DFSNWTKVET VLEAKATNPN SRLQLTTTTK GVIWLDQVSA MPLDTYKGHG 240 FRSDLLQMLV DLKPSFIRFP GGCFVEGDYL RNAFRWKAAV GPWEERPGHF GDVWKYWTDD 300 GLGYYEFLQL SEDLGALPIW VFNNGVSHND EVDTSAVLPF VQEALDGLEF ARGDPTSKWG 360 SMRAAMGHPE PFNLKYVAVG NEDCGKKNYR GNYLRFYDAI RRAYPDIQII SNCDGSSRPL 420 DHPADMYDYH IYTNANDMFS RSTTFNRVTR SGPKAFVSEY AVTGNDAGQG SLLAALAEAG 480 FLIGLEKNSD IVHMASYAPL FVNANDRRWN PDAIVFNSFQ LYGTPSYWMQ LFFSESNGAT 540 LLNSSLQTTA SNSLVASAIT WQNSVDKKNY IRIKAVNFGT SAVNLKISFN GLDPNSLQSS 600 GSTKTVLTST NLMDENSFSQ PKKVIPIQSL LQSVGKDMNV IVPPHSFTSF DLLKESSNLK 660 MLESDSSSWS SI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 4.0e-39 | 240 | 646 | 481 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-45 | 458 | 646 | 206 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 5.0e-55 | 458 | 646 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 22 | 672 | 20 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 21 | 672 | 19 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 21 | 672 | 19 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 1 | 672 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002523672.1 | 0 | 25 | 672 | 29 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 4e-20 | 240 | 552 | 48 | 372 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 4e-20 | 240 | 552 | 48 | 372 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 4e-20 | 240 | 552 | 48 | 372 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 4e-20 | 240 | 552 | 48 | 372 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 4e-20 | 240 | 552 | 48 | 372 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
