Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr7g087880.1 |
Family | GH51 |
Protein Properties | Length: 344 Molecular Weight: 38612.4 Isoelectric Point: 5.1494 |
Chromosome | Chromosome/Scaffold: 7 Start: 26970562 End: 26972635 |
Description | alpha-L-arabinofuranosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH51 | 32 | 231 | 0 |
SSEALDGIEFARGSSTSQWGSLRASMGHPEPFDLRFVAIGNEDCHKYNYLGNYLKFYEAIKHDYPDIQIISNCDGSIHQLDHPADLYDFHIYTDSKDMFS DYTKFDNAPRSGPKAFVSEYAVWKEDAGAGSLYAAVAEAAFLIGLEKNSDIVSMVAYAPLFLNTNDRKWIPDAIVFNSYQNYGTPSYWLQQLFIESSGAT |
Full Sequence |
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Protein Sequence Length: 344 Download |
MMKLIRLIFH HLCKYTFLHS IFHFFIEIIF YSSEALDGIE FARGSSTSQW GSLRASMGHP 60 EPFDLRFVAI GNEDCHKYNY LGNYLKFYEA IKHDYPDIQI ISNCDGSIHQ LDHPADLYDF 120 HIYTDSKDMF SDYTKFDNAP RSGPKAFVSE YAVWKEDAGA GSLYAAVAEA AFLIGLEKNS 180 DIVSMVAYAP LFLNTNDRKW IPDAIVFNSY QNYGTPSYWL QQLFIESSGA TLLNSTLQNS 240 SSSIVASAIE YKNSQDGKNY LRVKVVNFGN ATENFMISIN GLNSIVQSSN SSMVVLTSSN 300 RMDENSFSEP NKIVPQRTAL GNASNDMDVR LPPYSVTSFD LSI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3534 | AbfA | 7.0e-10 | 35 | 336 | 374 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
pfam06964 | Alpha-L-AF_C | 3.0e-29 | 149 | 335 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
smart00813 | Alpha-L-AF_C | 9.0e-38 | 149 | 335 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. |
Gene Ontology | |
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GO Term | Description |
GO:0046373 | L-arabinose metabolic process |
GO:0046556 | alpha-N-arabinofuranosidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV08815.1 | 0 | 28 | 343 | 329 | 646 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
GenBank | ABV08816.1 | 0 | 28 | 343 | 331 | 648 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
GenBank | ACM43507.1 | 0 | 28 | 343 | 30 | 350 | alpha-L-arabinofuranosidase [Prunus salicina] |
RefSeq | XP_002307940.1 | 0 | 31 | 341 | 340 | 650 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523672.1 | 0 | 28 | 341 | 343 | 658 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2c_L | 0.000000002 | 34 | 313 | 133 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_K | 0.000000002 | 34 | 313 | 133 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_J | 0.000000002 | 34 | 313 | 133 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_I | 0.000000002 | 34 | 313 | 133 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
PDB | 3s2c_H | 0.000000002 | 34 | 313 | 133 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795948 | 309 | 35 | 341 | 0 |
HO780740 | 309 | 35 | 341 | 0 |
HO852683 | 310 | 36 | 343 | 0 |
GT048615 | 289 | 36 | 323 | 0 |
GE473640 | 298 | 36 | 331 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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