| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr7g088440.1 |
| Family | GH51 |
| Protein Properties | Length: 649 Molecular Weight: 71585.5 Isoelectric Point: 6.8746 |
| Chromosome | Chromosome/Scaffold: 7 Start: 27248557 End: 27254152 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 215 | 645 | 0 |
| KGTIWLDQVSAMPQDTYKGHGFRTDLVEMVQKLKPAFLRFPGGCFVEGVTLRNAFRWKESVGPWEERAGHFNDIWKYWTDDGLGFYEGLLLAEDVNATPI WVFNNGISHTDEIDTKDIQPFVQEALDGIEFARGPSSSKWGSLRASMGHPEPFVLKYVAIGNEDCGLKNYLGNYLVFHKEIRKYYPDILMISNCDASRKP LDHPADLYDYHIYPVDDVHMMFTNAEVFDHTPRNGPKAFVSEYALIGANIARHGTLIGGLSEAGFLIGLERNSDHVAMAAYAPLFVNANDRVWNPDAIVF SSNQVYGTPSYWVTYLFKESNGATFLNSTLQTTDPGTLAASAILVKDPQNKNTYLKIKIANMRKTQVDFKISIQGFASKNLKGSTKTVLTGNELDENSFA EPKKIAPQTSPLQNPGNEMNVIVQPTSLTIL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 649 Download |
| MVFSKSCSSF LRLCLIIVSF IAFQCNADGG QTSTLVVNAA QGRPMPDTLF GVFYEEINHA 60 GAGGLWSELV NNRGFEAGGK KMPSNFAPWT IVGTETTIHV ETELSSCFER NKVALRMDVL 120 CDNCPFDGVG ISNPGYWGMN IVKGKKYKVV FYYSSTGPLD LTVSFRDGQG GGAILGSSHI 180 IKPNKKGAKW KKIESIITAS ASSPNAGITL RTTKKGTIWL DQVSAMPQDT YKGHGFRTDL 240 VEMVQKLKPA FLRFPGGCFV EGVTLRNAFR WKESVGPWEE RAGHFNDIWK YWTDDGLGFY 300 EGLLLAEDVN ATPIWVFNNG ISHTDEIDTK DIQPFVQEAL DGIEFARGPS SSKWGSLRAS 360 MGHPEPFVLK YVAIGNEDCG LKNYLGNYLV FHKEIRKYYP DILMISNCDA SRKPLDHPAD 420 LYDYHIYPVD DVHMMFTNAE VFDHTPRNGP KAFVSEYALI GANIARHGTL IGGLSEAGFL 480 IGLERNSDHV AMAAYAPLFV NANDRVWNPD AIVFSSNQVY GTPSYWVTYL FKESNGATFL 540 NSTLQTTDPG TLAASAILVK DPQNKNTYLK IKIANMRKTQ VDFKISIQGF ASKNLKGSTK 600 TVLTGNELDE NSFAEPKKIA PQTSPLQNPG NEMNVIVQPT SLTILDMF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 7.0e-35 | 465 | 641 | 187 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 8.0e-38 | 235 | 645 | 480 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 5.0e-41 | 465 | 641 | 183 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 20 | 648 | 21 | 655 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 20 | 648 | 21 | 658 | alpha-L-arabinofuranosidase [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 6 | 648 | 3 | 655 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 1 | 648 | 1 | 651 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 19 | 648 | 30 | 659 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vrk_C | 5e-17 | 218 | 647 | 38 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_B | 5e-17 | 218 | 647 | 38 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_A | 5e-17 | 218 | 647 | 38 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 3ug5_F | 7e-17 | 234 | 647 | 67 | 501 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 3ug5_E | 7e-17 | 234 | 647 | 67 | 501 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
