| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 60639.m00004 |
| Family | CBM13 |
| Protein Properties | Length: 194 Molecular Weight: 21563.4 Isoelectric Point: 5.1026 |
| Chromosome | Chromosome/Scaffold: 60639 Start: 1984 End: 2568 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM13 | 80 | 190 | 6.3e-23 |
| YGLCFQANSGPVWLEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFKNDRTILNLYSGLVLDVRVSDPSLKQIIL YPLHGDPNQIW | |||
| Full Sequence |
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| Protein Sequence Length: 194 Download |
| MVPNSMCTIY DCNTAATDAT RWQIWDNRTI INPRSSLVLA ATSGNSGTTL TVQTNIYAVS 60 QGWLPTNNTQ PFVTTIVGLY GLCFQANSGP VWLEDCSSEK AEQQWALYAD GSIRPQQNRD 120 NCLTSDSNIR ETVVKILSCG PASSGQRWMF KNDRTILNLY SGLVLDVRVS DPSLKQIILY 180 PLHGDPNQIW LPLF |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00161 | RICIN | 4.0e-6 | 8 | 64 | 58 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| cd00161 | RICIN | 3.0e-6 | 111 | 190 | 81 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| pfam00652 | Ricin_B_lectin | 1.0e-6 | 8 | 63 | 56 | + Ricin-type beta-trefoil lectin domain. | ||
| pfam00652 | Ricin_B_lectin | 8.0e-26 | 71 | 190 | 125 | + Ricin-type beta-trefoil lectin domain. | ||
| cd00161 | RICIN | 9.0e-28 | 75 | 191 | 121 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rtj_B | 0 | 3 | 194 | 71 | 262 | B Chain B, Agglutinin From Ricinus Communis With Galactoaza |
| PDB | 3rti_B | 0 | 3 | 194 | 71 | 262 | B Chain B, Agglutinin From Ricinus Communis With Galactoaza |
| PDB | 2aai_B | 0 | 3 | 194 | 71 | 262 | B Chain B, Crystallographic Refinement Of Ricin To 2.5 Angstroms |
| PDB | 1rzo_D | 0 | 3 | 194 | 71 | 262 | B Chain B, Agglutinin From Ricinus Communis With Galactoaza |
| PDB | 1rzo_D | 0.00001 | 73 | 192 | 10 | 133 | B Chain B, Agglutinin From Ricinus Communis With Galactoaza |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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