| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 470376 |
| Family | AA3 |
| Protein Properties | Length: 761 Molecular Weight: 83994.7 Isoelectric Point: 8.6255 |
| Chromosome | Chromosome/Scaffold: 1 Start: 1255279 End: 1258138 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 236 | 758 | 0 |
| EDRDSDTYKIECDAVVVGSGCGGGVAAAILAKSGLRVVVIEKGNYFVPRDYSALEGPSMFELFESNSLLMTHDGRFRFMAGSTVGGGSVVNWAASLKTPD AIIEEWSVHRGISVYSSEKYKAAMDRVLKRLGVTEKINSEGFQNRILRKGCEKLGLDVTIVPRNSTEKHNCGSCSFGCPTGEKRGTDSTWLVDAVNNNAV ILTQCKAEKLILADNNAHQREESGRRKRCLGVTASLSNRTRKKLQINAKVTIVACGSLKTPGLLASSGLKNPNIGRGLHIHPILMAWGYFPERNSDFQGA AHEGEIVTSLHYVHPMEDSTTPNITLETPAIGPGTFAALAPWVSGPDMKERLAKYARTSHIFVMVRDEGVGEVKGDIVKYRLTKADEENLTTGLKQALRI LVAAGAAEVGTYRSDGQRMKCSGIKQEDVEAFLQAVNAPAGVVSMSKHWTQSFTAHQMGCCRMGATEKAGAIDGKGESWEAEDLYVCDASVLPTALGVNP MITVQSTAYCISNRIAELMKKKK | |||
| Full Sequence |
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| Protein Sequence Length: 761 Download |
| MVGGRRRLGK RGSPWLRWSA KQESFSHGFS QSDLQALSAI CDAIMPPVPL ESLNLEMKLK 60 VLRNDALLSF FKSSTSESHV RPDEVAELLA TKAIPLTVLV VRIVLRILTF RLGTLLLCGL 120 VCLDMKNWPF LLKFSEMSLE KREKVLQRWN TQWYNPLARI GFMMIKAIFL FYYFTWTNEN 180 TENPAWDAIN YRVEIGENEG MEQKERPLDQ GIIETAKEDE MTIKQRMINK GLKVTEDRDS 240 DTYKIECDAV VVGSGCGGGV AAAILAKSGL RVVVIEKGNY FVPRDYSALE GPSMFELFES 300 NSLLMTHDGR FRFMAGSTVG GGSVVNWAAS LKTPDAIIEE WSVHRGISVY SSEKYKAAMD 360 RVLKRLGVTE KINSEGFQNR ILRKGCEKLG LDVTIVPRNS TEKHNCGSCS FGCPTGEKRG 420 TDSTWLVDAV NNNAVILTQC KAEKLILADN NAHQREESGR RKRCLGVTAS LSNRTRKKLQ 480 INAKVTIVAC GSLKTPGLLA SSGLKNPNIG RGLHIHPILM AWGYFPERNS DFQGAAHEGE 540 IVTSLHYVHP MEDSTTPNIT LETPAIGPGT FAALAPWVSG PDMKERLAKY ARTSHIFVMV 600 RDEGVGEVKG DIVKYRLTKA DEENLTTGLK QALRILVAAG AAEVGTYRSD GQRMKCSGIK 660 QEDVEAFLQA VNAPAGVVSM SKHWTQSFTA HQMGCCRMGA TEKAGAIDGK GESWEAEDLY 720 VCDASVLPTA LGVNPMITVQ STAYCISNRI AELMKKKKKD * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0007 | 638 | 754 | 121 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-19 | 613 | 746 | 134 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-23 | 265 | 759 | 556 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-88 | 294 | 518 | 228 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10696.1 | 0 | 1 | 760 | 1 | 736 | Unknown protein [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 25 | 756 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 14 | 757 | 7 | 738 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_171895.2 | 0 | 1 | 760 | 1 | 758 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 14 | 756 | 9 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.000006 | 249 | 743 | 14 | 494 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1coy_A | 0.000006 | 249 | 743 | 14 | 494 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 3t37_A | 0.00002 | 243 | 729 | 14 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 2gew_A | 0.001 | 682 | 743 | 433 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1n4w_A | 0.001 | 682 | 743 | 433 | 489 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 632 | 126 | 754 | 0 |
| HO779224 | 450 | 218 | 665 | 0 |
| EX275136 | 291 | 459 | 747 | 0 |
| DC883850 | 477 | 294 | 761 | 0 |
| HO811216 | 328 | 429 | 754 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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