| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.001G179800.2 |
| Family | AA3 |
| Protein Properties | Length: 743 Molecular Weight: 81320 Isoelectric Point: 7.0884 |
| Chromosome | Chromosome/Scaffold: 01 Start: 27563980 End: 27568110 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 227 | 741 | 1.12104e-44 |
| DHNVFNIKCDVVIVGSGCGGGVAAAVLASSGQKVVVIEKGNYFATTDYTSLEGPSMSELYEYGGFLTTTNGKFMIMAGSTVGGGSAINWSASIKTPNNVL KEWSLDHKIPLFGSSEYENAMDAVYQRLGVTENCTEEGLQNQVLRKGCENLGLKVEAVPRNSPEDHYCGSCNLGCRTGDKKGTATTWLVDAQGYGAVILT ACKADRLMLVNNNEDARRRKKCLGVVATSLNKNLTKKLQFEAKTTISACGSLLTPPLMISSGLKNPNIGRNLHLHPALVAWGYFPEDETGIKGKSYEGGI ITSFNRIVSEESNNVHAIIQAPALGPASFAAISPWVSGRELKERMVRYPRLAHLFTLIRDQGSGEVMEEGKIKYRLSEVDKENLKIGLRQVLRVLIAAGA VEVGTHRSDGQRIKCKGLTEESLQEFLDNVPVVGGLSSKDEYWTLYLTAHQIGSCRMGATEEEGAVDENGQSWEAEGLFVCDASVLPTAIGVNPMITIQS TSYCISNKIAQLLKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 743 Download |
| MEIGNHETGD AHPLLRGGRR KTTYTHGFSS AQIQSLAAIC EALIPPLPLD SAHQASSLDA 60 FYKASGAEPP LPDEVAEMMV KRVVEPRVLS FVKVVLTVIS FRLGALLLCG WDCCDWKWPF 120 IHKFSELPVE RREKILMKWS SNGHHRLPLR AVFALIKTYC LFIFFSMTDE KSENPSWKAI 180 GYNVDKRQKR VSSPHGRKGI IETMHEDDST FVQSLTEKGL QVTEDPDHNV FNIKCDVVIV 240 GSGCGGGVAA AVLASSGQKV VVIEKGNYFA TTDYTSLEGP SMSELYEYGG FLTTTNGKFM 300 IMAGSTVGGG SAINWSASIK TPNNVLKEWS LDHKIPLFGS SEYENAMDAV YQRLGVTENC 360 TEEGLQNQVL RKGCENLGLK VEAVPRNSPE DHYCGSCNLG CRTGDKKGTA TTWLVDAQGY 420 GAVILTACKA DRLMLVNNNE DARRRKKCLG VVATSLNKNL TKKLQFEAKT TISACGSLLT 480 PPLMISSGLK NPNIGRNLHL HPALVAWGYF PEDETGIKGK SYEGGIITSF NRIVSEESNN 540 VHAIIQAPAL GPASFAAISP WVSGRELKER MVRYPRLAHL FTLIRDQGSG EVMEEGKIKY 600 RLSEVDKENL KIGLRQVLRV LIAAGAVEVG THRSDGQRIK CKGLTEESLQ EFLDNVPVVG 660 GLSSKDEYWT LYLTAHQIGS CRMGATEEEG AVDENGQSWE AEGLFVCDAS VLPTAIGVNP 720 MITIQSTSYC ISNKIAQLLK KE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.002 | 676 | 724 | 50 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| PRK02106 | PRK02106 | 0.0008 | 674 | 736 | 64 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-20 | 598 | 725 | 128 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-21 | 304 | 742 | 495 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-83 | 282 | 503 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 24 | 741 | 1 | 718 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 10 | 741 | 4 | 737 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 6 | 742 | 4 | 749 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 10 | 741 | 4 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 12 | 741 | 8 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00001 | 234 | 714 | 17 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3nne_H | 0.0007 | 423 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0007 | 423 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0007 | 423 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_E | 0.0007 | 423 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO794753 | 742 | 10 | 739 | 0 |
| ES809260 | 363 | 141 | 502 | 0 |
| HO779224 | 448 | 205 | 652 | 0 |
| DW483572 | 277 | 213 | 489 | 0 |
| ES809260 | 116 | 413 | 525 | 0.00000003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
