| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s48_250V6.1 |
| Family | AA3 |
| Protein Properties | Length: 779 Molecular Weight: 83720.5 Isoelectric Point: 8.6672 |
| Chromosome | Chromosome/Scaffold: 48 Start: 2080803 End: 2084756 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 269 | 775 | 0 |
| YLQCDAVVVGSGSGGGVMAAALAKQGFKVVVLEKGQYFAAQDMSTLEGPTLLNMFEKMGAMATDDGGVALIAGKSVGGGTTINWSVSLKTPQNVRDEWAN EHGLDMFNSERYDKATQAVCDRISVQPNVDKHSIQNIILREGCKKLGYHHGTLSRNCASDHYCGWCTYGCPTGKKQSTAQTWLVDAVNTGNALILSNCTA DYVFHGANPGGVKGSKAQGVAATIVGGPNRVYIKANATVVSCGALMTPVLLLKSGLKNPNIGKYLRLHPASTCYGYFPEGTGPEGRPYEGGIMTEYAPVN FRKPTEYGGLLETGVFHPGAFSAFHAWGSGADNKERLLRHGRTSHITVVVRDKGFGTVEIDKGRNPKISYKMSKYDQETTVAGMVQSLRVLVAAGAVEVG SQQLGAERFNAKGASPSDIEAYLNRVERRGASETTAQIISAHQLGSCRMGTSPSTSAADPRGEIWEVEGLFVGDGSVLPTAPGVNPMVTIQSVAFCTAEH IVQYLNK | |||
| Full Sequence |
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| Protein Sequence Length: 779 Download |
| MGIGNGAGID EKKIAKLVLH AHPSLLRWAP PCKHNFTPAQ FEALKAVCDT IVPSLPPPFK 60 DGEAFELMRG VTAEDVARFY EANASDEGVA EVVAASLEVL VRPVVLKTML QVLSLLSTGW 120 GTALLAVVGR VNILTFKYPV FRKFSRLPLR DQEKVLRGWS TSPLPQFRLL FKAFKSVGGW 180 AFYSKVNEYG YNVSWKAIGY PGVAPEVRNR TEADYKQPRP LGDAHVDAKE AGAGLKSILA 240 SKGFVVEEVE SFRSQSEKLG FSKNDNDVYL QCDAVVVGSG SGGGVMAAAL AKQGFKVVVL 300 EKGQYFAAQD MSTLEGPTLL NMFEKMGAMA TDDGGVALIA GKSVGGGTTI NWSVSLKTPQ 360 NVRDEWANEH GLDMFNSERY DKATQAVCDR ISVQPNVDKH SIQNIILREG CKKLGYHHGT 420 LSRNCASDHY CGWCTYGCPT GKKQSTAQTW LVDAVNTGNA LILSNCTADY VFHGANPGGV 480 KGSKAQGVAA TIVGGPNRVY IKANATVVSC GALMTPVLLL KSGLKNPNIG KYLRLHPAST 540 CYGYFPEGTG PEGRPYEGGI MTEYAPVNFR KPTEYGGLLE TGVFHPGAFS AFHAWGSGAD 600 NKERLLRHGR TSHITVVVRD KGFGTVEIDK GRNPKISYKM SKYDQETTVA GMVQSLRVLV 660 AAGAVEVGSQ QLGAERFNAK GASPSDIEAY LNRVERRGAS ETTAQIISAH QLGSCRMGTS 720 PSTSAADPRG EIWEVEGLFV GDGSVLPTAP GVNPMVTIQS VAFCTAEHIV QYLNKFKI* 780 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR02462 | pyranose_ox | 8.0e-7 | 710 | 773 | 64 | + pyranose oxidase. Pyranose oxidase (also called glucose 2-oxidase) converts D-glucose and molecular oxygen to 2-dehydro-D-glucose and hydrogen peroxide. Peroxide production is believed to be important to the wood rot fungi in which this enzyme is found for lignin degradation. | ||
| TIGR03970 | Rv0697 | 1.0e-8 | 441 | 769 | 339 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 3.0e-21 | 624 | 762 | 144 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 7.0e-29 | 290 | 770 | 534 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-59 | 322 | 538 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001753124.1 | 0 | 101 | 774 | 1 | 693 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761391.1 | 0 | 1 | 93 | 1 | 93 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761391.1 | 0 | 148 | 778 | 58 | 685 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001763007.1 | 0 | 22 | 774 | 18 | 765 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002328753.1 | 0 | 41 | 775 | 1 | 743 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3nne_H | 0.000006 | 341 | 769 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.000006 | 341 | 769 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.000006 | 341 | 769 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_E | 0.000006 | 341 | 769 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_D | 0.000006 | 341 | 769 | 90 | 526 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC437705 | 253 | 303 | 555 | 0 |
| FC433224 | 246 | 534 | 779 | 0 |
| FC433225 | 277 | 69 | 345 | 0 |
| FC374832 | 244 | 536 | 779 | 0 |
| FC402129 | 255 | 231 | 485 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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