| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10006882m |
| Family | AA3 |
| Protein Properties | Length: 764 Molecular Weight: 84486.5 Isoelectric Point: 8.6835 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14600124 End: 14602971 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 233 | 761 | 4.2039e-45 |
| LIVTEDKESDSYKIECDAVVVGSGCGGGVAAANLAKSGLRVVILEKGNYFVPRDYSALEGPSTFELFEAHSLLMTHDGRFRFMAGSTVGGGSVVNWAASL KTPDAIINEWSVDRGIAIFAREEYTAAMERVCKRIGVTEKIIKEGFQNQILRKGCEKLGLDVTVVPRNSSEKHYCGSCSFGCRTGDKRGTDSTWLVDAVN NNAVILTQCRAEKLILADNDAQTRKQSGRKKICLGVTACPSNRTRKKLQINAKVTVVACGSLMTPGLLASSGLRNPNIGRGLHIHPILMVWGYFPEKNSD FNGAAHEGEIVTSLHYVFEIDSTTTPNITLETPAIGPGTFAALIPWVSGSDMKNRLAKYARTSHIFAMIRDEGVGEVKGGLVKYRLTKADEENLAIGLKQ ALRILVAAGAEEVGTYRSDGQRIKCKGIKEEDLEAFLRTVNVPAGAVSMSKHWTHSFTAHQMGCCRMGATEKEGAIDGYGESWEAQDLYVCDASVLPTAL GVNPMITIQSTAYCISNRIAMLMEKKKKK | |||
| Full Sequence |
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| Protein Sequence Length: 764 Download |
| MVGEKRKRGE KRGNPLLRWS VKQESFTHGF SRSDLQALSA ICEAIMPPVP LLSLDLDMKL 60 KVLRNDALLS FFKSSSDQSH VRPDEVAEVM ATKAMPVTVK VVRIVLRLLT FRLGTLLLCG 120 FVCLDKKNWP FLLKFSDISL DKREKVLQKW STQWYNPLVR IAFMMIKAIF LFYYFTWTNE 180 NSETPAWDAI GYSVNLGENE DMEHRERPLE KGIIETAKED EMSIKQRLIN KGLIVTEDKE 240 SDSYKIECDA VVVGSGCGGG VAAANLAKSG LRVVILEKGN YFVPRDYSAL EGPSTFELFE 300 AHSLLMTHDG RFRFMAGSTV GGGSVVNWAA SLKTPDAIIN EWSVDRGIAI FAREEYTAAM 360 ERVCKRIGVT EKIIKEGFQN QILRKGCEKL GLDVTVVPRN SSEKHYCGSC SFGCRTGDKR 420 GTDSTWLVDA VNNNAVILTQ CRAEKLILAD NDAQTRKQSG RKKICLGVTA CPSNRTRKKL 480 QINAKVTVVA CGSLMTPGLL ASSGLRNPNI GRGLHIHPIL MVWGYFPEKN SDFNGAAHEG 540 EIVTSLHYVF EIDSTTTPNI TLETPAIGPG TFAALIPWVS GSDMKNRLAK YARTSHIFAM 600 IRDEGVGEVK GGLVKYRLTK ADEENLAIGL KQALRILVAA GAEEVGTYRS DGQRIKCKGI 660 KEEDLEAFLR TVNVPAGAVS MSKHWTHSFT AHQMGCCRMG ATEKEGAIDG YGESWEAQDL 720 YVCDASVLPT ALGVNPMITI QSTAYCISNR IAMLMEKKKK KKD* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.007 | 660 | 752 | 97 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-19 | 616 | 747 | 132 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-25 | 266 | 740 | 537 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-87 | 296 | 519 | 227 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD10696.1 | 0 | 1 | 760 | 1 | 735 | Unknown protein [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 26 | 752 | 1 | 713 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 14 | 758 | 6 | 738 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_171895.2 | 0 | 1 | 760 | 1 | 757 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 14 | 757 | 8 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gew_A | 0.0001 | 683 | 744 | 433 | 489 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1n4w_A | 0.0001 | 683 | 744 | 433 | 489 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1n4v_A | 0.0001 | 683 | 744 | 433 | 489 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1n4u_A | 0.0001 | 683 | 744 | 433 | 489 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 1n1p_A | 0.0001 | 683 | 744 | 433 | 489 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 745 | 14 | 755 | 0 |
| HO779224 | 450 | 219 | 666 | 0 |
| EX275136 | 292 | 460 | 749 | 0 |
| DC883850 | 470 | 297 | 751 | 0 |
| FN753067 | 280 | 269 | 547 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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