| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_002379m |
| Family | AA3 |
| Protein Properties | Length: 739 Molecular Weight: 80960.1 Isoelectric Point: 8.4372 |
| Chromosome | Chromosome/Scaffold: 10563 Start: 993070 End: 996602 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 220 | 735 | 0 |
| KDPGHNLYKINCDVAIVGSGCGGGVAAAMLATSGQKVVVLEKGNYFTANDYSGLEGPSKKELYESGGVLPTVDGKVMILAGSVVGGGSAINWSACINTPK PVLKEWAENHKLRLFGSSEYLAAMDTVCKRIGVTENCIEEGFQNQVLRKGCQKLGFEINSVPRNSSEKHYCGSCGYGCQQGDKKGTDSTWLVDAVNHGAV ILTGCKAERFILEHNKSGSKRKKKCLGVMARSLNNNISMRFQIEAKVTISACGALLTPPLMIASGLKNPNIGRNLHLHPVLMAWGYFPDSNSELKGKSYD GGIITSVHKVVAKDSTTRAIIETPQLGPASLASLIPWECGRDIKNRMLRFSRTAHLIAIIRDQGSGQVKVEGRVSYNLNALDRENLKAGLRQSLRILVAA GAVEVGTHRSDGQRIKCEGISNKELEEFLDRVAPCGGPLTPVKDWMIYTSAHQMGSCRMGINEKEGAVDENGESWEAEGLFVCDASVLPSAVGVNPMITV QSTAYCLSKRLAESLR | |||
| Full Sequence |
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| Protein Sequence Length: 739 Download |
| MKKDWHPLLR GKREGKYRHG FSSAEMITLG SICEAAFPPI HIDEKEPQPS KAVKDFFRAS 60 GAHNSIPDEL AELVVQRGFI EIVIVMRLVL LILSTRVGTL LLCGSLCLGE KWPYINSFSS 120 MSLEKREKVL QKWFKHRFFT PIRVGLIFLK VGCLYVFFNR VDENGENPSW EAIDYKTKSD 180 KNPTQVPNER PLQEGVIETM FETDSTLVDN LTQKGLEVTK DPGHNLYKIN CDVAIVGSGC 240 GGGVAAAMLA TSGQKVVVLE KGNYFTANDY SGLEGPSKKE LYESGGVLPT VDGKVMILAG 300 SVVGGGSAIN WSACINTPKP VLKEWAENHK LRLFGSSEYL AAMDTVCKRI GVTENCIEEG 360 FQNQVLRKGC QKLGFEINSV PRNSSEKHYC GSCGYGCQQG DKKGTDSTWL VDAVNHGAVI 420 LTGCKAERFI LEHNKSGSKR KKKCLGVMAR SLNNNISMRF QIEAKVTISA CGALLTPPLM 480 IASGLKNPNI GRNLHLHPVL MAWGYFPDSN SELKGKSYDG GIITSVHKVV AKDSTTRAII 540 ETPQLGPASL ASLIPWECGR DIKNRMLRFS RTAHLIAIIR DQGSGQVKVE GRVSYNLNAL 600 DRENLKAGLR QSLRILVAAG AVEVGTHRSD GQRIKCEGIS NKELEEFLDR VAPCGGPLTP 660 VKDWMIYTSA HQMGSCRMGI NEKEGAVDEN GESWEAEGLF VCDASVLPSA VGVNPMITVQ 720 STAYCLSKRL AESLRREQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.0001 | 668 | 735 | 69 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 2.0e-21 | 592 | 726 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 5.0e-22 | 249 | 738 | 548 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-82 | 280 | 499 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 1 | 736 | 1 | 737 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285334.1 | 0 | 1 | 736 | 1 | 737 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 1 | 737 | 1 | 744 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 26 | 737 | 1 | 716 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 1 | 738 | 1 | 746 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.000007 | 227 | 709 | 14 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.009 | 419 | 735 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.009 | 419 | 735 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO794753 | 740 | 1 | 734 | 0 |
| HO779224 | 446 | 202 | 647 | 0 |
| HO811216 | 324 | 413 | 734 | 0 |
| EX275136 | 292 | 437 | 728 | 0 |
| ES815664 | 350 | 333 | 679 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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