| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10004212m |
| Family | AA3 |
| Protein Properties | Length: 755 Molecular Weight: 82863 Isoelectric Point: 6.4608 |
| Chromosome | Chromosome/Scaffold: 7 Start: 4629889 End: 4632809 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 235 | 747 | 3.22299e-44 |
| GENVHRIRCDAVVVGSGSGGGVAAANLAKAGLKVLVLEKGNYFAAQDYSGLEGPSMLELYEKGGFLTSVDGKFMILAGSAVGGGTAINWSASIRTPDHVL QEWSEESKIKFFGSQEYKTAMDEVTTRIGVTDKCVKDGFQNQVLRKGCERLGLQVESVPRNSHEDHYCGLCGYGCRAGDKNGTDQTWLVDAVENGAVILT GIKAERFILVDNTDSSSNERQKRCVGVIASSVGGKIGKKFMIEARVTVSSAGSLLTPPLMLSSGLKNQNIGRNLTLHPVLMTWGYFPEKDSEFSGKMYEG GIITSLHHMNDAESGCKAILENPLIGPASYAGLSPWVSGADLKERMMKYARTAHLFALVRDIGSGEVMKENEITYRTTKKDRENLRAGLRQALRVLIAAG AAEVGTYRSDGQRIKCEGTSREAIEEFLDEVDAVGGVSTKGEYWTTYFSAHQMSSCRMGATAEEGALDENGESFEAEGLFVCDGSVLPSAVGVNPMITIQ STAYCISTRIVDS | |||
| Full Sequence |
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| Protein Sequence Length: 755 Download |
| MEEDRRTRRR NSGGHPLLRS KKREEEQVGY YNHGFSPSQI HSLAAICQTL LPPSDQQSFD 60 SFNVASSTQP PFTDEVAEMI VKNGRSEAVK VLRIILMILS FRFGTLLLCG SLCLDKSWPF 120 VLKFSELPLD RREEILRKWS RKSGFLLPFR ITFFLSKFYT LFYFFSQTDE NQKNPALEAI 180 GYSLDTADAS SNKKTEADEK RRPLQRGIVE TMHESDITIT QTLTEKGVYV AKDDGENVHR 240 IRCDAVVVGS GSGGGVAAAN LAKAGLKVLV LEKGNYFAAQ DYSGLEGPSM LELYEKGGFL 300 TSVDGKFMIL AGSAVGGGTA INWSASIRTP DHVLQEWSEE SKIKFFGSQE YKTAMDEVTT 360 RIGVTDKCVK DGFQNQVLRK GCERLGLQVE SVPRNSHEDH YCGLCGYGCR AGDKNGTDQT 420 WLVDAVENGA VILTGIKAER FILVDNTDSS SNERQKRCVG VIASSVGGKI GKKFMIEARV 480 TVSSAGSLLT PPLMLSSGLK NQNIGRNLTL HPVLMTWGYF PEKDSEFSGK MYEGGIITSL 540 HHMNDAESGC KAILENPLIG PASYAGLSPW VSGADLKERM MKYARTAHLF ALVRDIGSGE 600 VMKENEITYR TTKKDRENLR AGLRQALRVL IAAGAAEVGT YRSDGQRIKC EGTSREAIEE 660 FLDEVDAVGG VSTKGEYWTT YFSAHQMSSC RMGATAEEGA LDENGESFEA EGLFVCDGSV 720 LPSAVGVNPM ITIQSTAYCI STRIVDSLQS KDKV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.001 | 606 | 733 | 129 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-20 | 606 | 740 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-29 | 261 | 733 | 539 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-90 | 290 | 513 | 227 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009055 | electron carrier activity |
| GO:0016491 | oxidoreductase activity |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK64154.1 | 0 | 7 | 754 | 4 | 748 | unknown protein [Arabidopsis thaliana] |
| GenBank | AAM63097.1 | 0 | 7 | 754 | 4 | 748 | unknown [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 31 | 748 | 1 | 716 | alcohol oxidase [Glycine max] |
| RefSeq | NP_194586.1 | 0 | 7 | 754 | 4 | 748 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 15 | 749 | 8 | 742 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.00000006 | 242 | 752 | 11 | 505 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1coy_A | 0.00000006 | 242 | 752 | 11 | 505 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1kdg_B | 0.000009 | 238 | 745 | 3 | 540 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.000009 | 238 | 745 | 3 | 540 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1naa_B | 0.00001 | 244 | 745 | 4 | 535 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
