| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi3g49085.1 |
| Family | AA3 |
| Protein Properties | Length: 767 Molecular Weight: 82477.3 Isoelectric Point: 7.9661 |
| Chromosome | Chromosome/Scaffold: 3 Start: 50467088 End: 50470479 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 243 | 760 | 3.36312e-44 |
| VECDVAIVGSGCGGGVTAAVLAAAGHKVVVIEKGSYFTSKDYTSIEGPSMRQLYESGGFVSTLSGSGLILAGSTVGGGSAVNWSACIKTPESVRGEWAGA HGGLPLFASPEYTAAMDAVFRRLGVTSGCQEEGLQNKVLRKGCEKLGYKVEPVSRNSSEGHFCGSCGYGCRTGDKRGTDTTWLVDAVRRGAVILTGCKAE KLLFSDYATAMTSAEKKKKKRCVGVVVATSSNPAITRKVEVRAKVTVSACGSLLTPVLLRDSGLANPHIGKNLHLHPTAMAWGYFPEDTRPDLKGKMYEG GIITSIHKVEGVDGVPPRAILETPLMGVAAAGTQFPWVSGRDMKERMLKYGRSVHIFSLVRDRGSGTVHGERRIAYHMDPADRENQREGLRRALRVLVAA GATEIGTHRSDGQRMKCKGATEEEVEEFLDGVTVLRGPQSKSENWSLCCTAHQMGSCRMAATALDGAVDARGESWEAERLYVCDASVLPSAVGVNPMITI QAVAYCLANGIAEQLKRD | |||
| Full Sequence |
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| Protein Sequence Length: 767 Download |
| MEEAKKQRMR QGHPLLRGGG GVSRSSYTHG FSATQMLALT AACGALVPSL PPDDAGSKAV 60 REFFLASAAD PPVPDEVAQL MSAMCLREAL ALIRTLLWLL GTRLGTLALC GSRCLSWQAP 120 FVRRFAEMPV ERREDALRRW SRETVLPPLR LFFLLLKVFC LYVFYSRIDE NSENPHWGAI 180 GYTPATDEAS AEEEEEKEQP TTKRPLDDGV VETIHHTDAS LPACLADKGL TVTEDAARNL 240 FRVECDVAIV GSGCGGGVTA AVLAAAGHKV VVIEKGSYFT SKDYTSIEGP SMRQLYESGG 300 FVSTLSGSGL ILAGSTVGGG SAVNWSACIK TPESVRGEWA GAHGGLPLFA SPEYTAAMDA 360 VFRRLGVTSG CQEEGLQNKV LRKGCEKLGY KVEPVSRNSS EGHFCGSCGY GCRTGDKRGT 420 DTTWLVDAVR RGAVILTGCK AEKLLFSDYA TAMTSAEKKK KKRCVGVVVA TSSNPAITRK 480 VEVRAKVTVS ACGSLLTPVL LRDSGLANPH IGKNLHLHPT AMAWGYFPED TRPDLKGKMY 540 EGGIITSIHK VEGVDGVPPR AILETPLMGV AAAGTQFPWV SGRDMKERML KYGRSVHIFS 600 LVRDRGSGTV HGERRIAYHM DPADRENQRE GLRRALRVLV AAGATEIGTH RSDGQRMKCK 660 GATEEEVEEF LDGVTVLRGP QSKSENWSLC CTAHQMGSCR MAATALDGAV DARGESWEAE 720 RLYVCDASVL PSAVGVNPMI TIQAVAYCLA NGIAEQLKRD LASGKN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam05199 | GMC_oxred_C | 2.0e-17 | 692 | 749 | 58 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 2.0e-24 | 314 | 755 | 475 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 5.0e-76 | 295 | 520 | 229 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN27562.1 | 0 | 10 | 766 | 7 | 768 | unknown [Zea mays] |
| GenBank | EEC73620.1 | 0 | 2 | 757 | 3 | 765 | hypothetical protein OsI_08118 [Oryza sativa Indica Group] |
| RefSeq | NP_001047464.1 | 0 | 2 | 757 | 3 | 765 | Os02g0621800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002454188.1 | 0 | 10 | 759 | 6 | 765 | hypothetical protein SORBIDRAFT_04g026370 [Sorghum bicolor] |
| RefSeq | XP_002454190.1 | 0 | 10 | 759 | 6 | 772 | hypothetical protein SORBIDRAFT_04g026390 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00005 | 244 | 756 | 17 | 519 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3nne_H | 0.0004 | 435 | 745 | 226 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0004 | 435 | 745 | 226 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0004 | 435 | 745 | 226 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_E | 0.0004 | 435 | 745 | 226 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 759 | 6 | 757 | 0 |
| DV483887 | 273 | 167 | 439 | 0 |
| HO779224 | 472 | 215 | 686 | 0 |
| CB676542 | 260 | 310 | 568 | 0 |
| DV475899 | 286 | 76 | 361 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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