| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 473529 |
| Family | GH116 |
| Protein Properties | Length: 948 Molecular Weight: 105676 Isoelectric Point: 6.5465 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15604322 End: 15610211 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 520 | 881 | 0 |
| GQFLYLEGIQYLMYNTYDVHFYSSFALLMLFPKLELSIQRDFAAAVLMHDSSKKQVMSSGEFVTRKALGAVPHDIGLNDPWFEVNAYNLFNTDRWKDLNS KFVLQVYRDVVATGDLNFAKAVWPSVYTAIAYLDQFDKDGDGMIENEGFPDQTYDAWSCSGVSAYCGGLWVAALQAGSALAREVGDNGAAVYFNAKYEKA RSVYEKLWNGSYFNYDNSRSGSSSSILADQLAGQWYARACGLKPIAKEEWIKKALETVYDFNVMRVRDGTRGAVNGMLPDGRVDTSTMVSREVWAGTTYS VAACMIQEGLADKGFRTASGIYEAAWSDRGLGCAFQTPEAWTTNDEFRSLCYMRPLAIWGIQ | |||
| Full Sequence |
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| Protein Sequence Length: 948 Download |
| MQNVPEDQNQ MVIDDKLPPF SWERKLNSQA KTPSEFKLSK RDHLHLFPLG YRLWRHTKDE 60 AAKGRASIFD IFRKHHITGD HGVPLGGIGA GSIGRSYKGE FQQFKLFPKI CEEAPILTNQ 120 FSAFVSRPGG VKHSTVLCPS KPQVIKDNGG YLCKGQVPNI GIESWDWNMT GEKSTYHALY 180 PRSWTVYDGE PDPELRIVSR QVSPFIPHNY EESSLPVSVF NFTVTNTGAE QAIVTLLFTW 240 ENSVGGASGL TGQHFNSTMK AKDGVHAVAL QHKTANGHPP VSYAIAAKET EDVRVSSCPC 300 FIVSGTTPNK ITAGDMWDEI KKNASFDKLT SNACSPSKPG TSIGAAIAAK VKVPPGCDRT 360 VTFSLSWDCP EARFDEKTYH RRYTRFYGSL GNAAVAMAHD ALLNFSEWET QIEEWQAPIL 420 ADTTLPEWYR ITLFNELYYF NSGGTMWTDG LPPKQSLDSI GRRKISLSIS TTDNTDPDQN 480 DIALDILGRI DAVCSQIHAP LSSNAALGTT MIQNTSENIG QFLYLEGIQY LMYNTYDVHF 540 YSSFALLMLF PKLELSIQRD FAAAVLMHDS SKKQVMSSGE FVTRKALGAV PHDIGLNDPW 600 FEVNAYNLFN TDRWKDLNSK FVLQVYRDVV ATGDLNFAKA VWPSVYTAIA YLDQFDKDGD 660 GMIENEGFPD QTYDAWSCSG VSAYCGGLWV AALQAGSALA REVGDNGAAV YFNAKYEKAR 720 SVYEKLWNGS YFNYDNSRSG SSSSILADQL AGQWYARACG LKPIAKEEWI KKALETVYDF 780 NVMRVRDGTR GAVNGMLPDG RVDTSTMVSR EVWAGTTYSV AACMIQEGLA DKGFRTASGI 840 YEAAWSDRGL GCAFQTPEAW TTNDEFRSLC YMRPLAIWGI QWAHTMPQPN REQEVSLKQQ 900 EEDATSVLFQ QHAGFIKVAH YLKNTKGKDH RNRLQTAYET FLRVIRL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.0005 | 588 | 736 | 163 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 7.0e-31 | 80 | 449 | 393 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 4.0e-65 | 82 | 408 | 340 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-72 | 519 | 880 | 381 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-172 | 520 | 882 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF97289.1 | 0 | 123 | 947 | 23 | 790 | AC010164_11 Hypothetical protein [Arabidopsis thaliana] |
| GenBank | AAM19831.1 | 0 | 6 | 947 | 10 | 922 | AT4g10060/T5L19_190 [Arabidopsis thaliana] |
| GenBank | AAO42222.1 | 0 | 1 | 947 | 1 | 947 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_174631.2 | 0 | 1 | 947 | 1 | 947 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | NP_192744.6 | 0 | 6 | 947 | 10 | 922 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 377 | 533 | 906 | 0 |
| JG703027 | 328 | 538 | 865 | 0 |
| FC917648 | 306 | 533 | 838 | 0 |
| FC895322 | 303 | 397 | 695 | 0 |
| DY268096 | 310 | 431 | 736 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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