| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s40_202V6.1 |
| Family | GH116 |
| Protein Properties | Length: 1130 Molecular Weight: 125379 Isoelectric Point: 6.6067 |
| Chromosome | Chromosome/Scaffold: 40 Start: 1454832 End: 1463706 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 703 | 1063 | 0 |
| GQFLYLEGIEYIMWNTYDVHFYASFALLSLFPKLELAIQRDFAAGCLAHDPRRTKFMAGGKKGIKKVFGSVPHDLGQHDPWAEVNAYNIHDTSRWKDLNA KFVLQVYRDVVATGDKVFAKAVWPAVYAAMAYLDQFDRDRDGLIENDGFPDQTYDTWTVHGVSAYCGGLWIAALQAAEAMAVLLEEKNAARYFQSKFIQA REAYLKKLWNGSYFSYDSGNSSNSKSIQADQMAGQWYAWASGLPPLFDDAKARSALQKIFDFNVMKVKNGHLGAVNGMHPNGKVDETCMQSREVWTGVTY ALAAAMIHEGMLDQAFRAAEGVFIAGWSDLGYWFQTPEAWTMDGYFRSLAYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 1130 Download |
| MSSHENSHDG SQASLNSGVK PRHHRQPSWP ISDYVQKPTL ALLEDDPGAP PHQAWRRKLN 60 SHAEVLKEFR VTFMEGFKML RLGMRMWTYV QSEKSEGRLP PIDPFRRETK PSACHGVPCG 120 GMGGGSIGRG FRGEFRRWQI VPGVCDEAPV LANQFSVFVR RRKESGGEKA VSSVLYPGRP 180 RELKGLKNDE NGISSWDWKL DGQNTTYHAL FPRAWTIYEG EPDPALKISC RQISPFIPHN 240 YKESSYPACV FSYVAVNTGK EVADVNLLFT WANSIGSTTG STGGHINETF TERDGVRGVV 300 LNHKTSVKGG QPLTFAIAAK QSPDVSLSAC PCFQVSGEGQ SITAKDLWGR MKEHGRLEVD 360 DWNTINTSLP SKPGSVIGAA IAAHVVIPPN EKRTIDFVLA WDSPTVKFLK GRSYLRRYTT 420 FYDADGNAAP RIAHNALCGY RLWEEEIEKW QRPILEDEKL PEWYRVTLFN ELYYLVAGGT 480 VWTDGGPPSE GKSELSAASS ANTSAPGSPL HGDLSLGGKV VPFSTRRDID LAALRRDCKD 540 GDVVAALEGS NKSSFNSSLE RTAASEVNAP ASAEPPALPT PVQHQQFEVE NKGTRNSSLS 600 MDPTEQDISD KLVAEFQHVQ GFPLNGTTIY DNDSDTQSDG MESISENHTL ESSLPRKEEL 660 ALQDTAETKI LKAMQESMGD FRRTSLGLPS GLALLQAEEE NVGQFLYLEG IEYIMWNTYD 720 VHFYASFALL SLFPKLELAI QRDFAAGCLA HDPRRTKFMA GGKKGIKKVF GSVPHDLGQH 780 DPWAEVNAYN IHDTSRWKDL NAKFVLQVYR DVVATGDKVF AKAVWPAVYA AMAYLDQFDR 840 DRDGLIENDG FPDQTYDTWT VHGVSAYCGG LWIAALQAAE AMAVLLEEKN AARYFQSKFI 900 QAREAYLKKL WNGSYFSYDS GNSSNSKSIQ ADQMAGQWYA WASGLPPLFD DAKARSALQK 960 IFDFNVMKVK NGHLGAVNGM HPNGKVDETC MQSREVWTGV TYALAAAMIH EGMLDQAFRA 1020 AEGVFIAGWS DLGYWFQTPE AWTMDGYFRS LAYMRPLAIW AMQWAIDPPE TIANAPRIPT 1080 VDRLPSECDT SGFSSMQSTL RNPLPQLRPF RRAYNFLRGK GKPNSKASQ* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-20 | 179 | 484 | 311 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-48 | 150 | 443 | 302 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-63 | 702 | 1067 | 386 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-153 | 703 | 1064 | 365 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG16864.1 | 0 | 700 | 1084 | 24 | 410 | AC069145_13 unknown protein [Oryza sativa Japonica Group] |
| RefSeq | XP_001759997.1 | 0 | 1 | 559 | 1 | 529 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001759997.1 | 0 | 688 | 1129 | 529 | 970 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001771187.1 | 0 | 1 | 503 | 1 | 487 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001771187.1 | 0 | 664 | 1108 | 502 | 945 | predicted protein [Physcomitrella patens subsp. patens] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC353536 | 231 | 598 | 828 | 0 |
| FC437419 | 284 | 770 | 1053 | 0 |
| FC448631 | 277 | 795 | 1071 | 0 |
| FC373528 | 224 | 688 | 911 | 0 |
| HO779860 | 272 | 845 | 1113 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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