| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.003G178000.2 |
| Family | GH116 |
| Protein Properties | Length: 976 Molecular Weight: 108658 Isoelectric Point: 6.7494 |
| Chromosome | Chromosome/Scaffold: 03 Start: 18588350 End: 18598388 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 557 | 919 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLALFPKIELNIQRDFAKAVLSEDGRKVRFLADGSVGIRKARGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMSFGVDVWPAVRTAMEYMEQFDRDDDGLVENDGFPDQTYDAWTVHGVSAYCGCLWLASLQAAAAMAMQLGDKYFAELCKSKFAKA KSAFESKLWNGSYFNYDSGSSNNSKSIQADQLAGEWYMASSGLPSLFDDVKIRSALNKIYDFNVMKVRGGKMGAVNGMHPNGKVDETCMQSREIWSGVTY AVAATMILSGMEDKAFTTAEGIFTAGWSEEGYGYWFQTPEAWTIDGHFRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 976 Download |
| MVSSNLFHCR KHSWPPEEYI SRNTLQLFDF DSAAPPEQAW RRRLNSHANI LKEFSVTFKE 60 AIQMVRLGIR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIVPGI CESSPVMANQ FSIFISRDGG NKNYASVLAP GQHEGIGKAG DQGISSWGWN 180 LSGQHSTYHA LFPRAWTVYD GEPDPELKIS CRQISPFIPH NYRDSSLPTA VFVYTLVNTG 240 KERAKVSLLF TWANSIGGIS HLSGDHVNEP FIGEDGVSGV LLHHKTAKGN PPVTFAIAAC 300 ETQNVSVTVL PSFGLSEGSC TTAKAMWGTM VQDGHFDRGN FNWGPSMPSS PGETLCAAVS 360 ASAWVEPHGK CTVAFALAWS SPKIKFLKGS SYHRRYTKFY GTSERAAQNL VHDALTNYKQ 420 WEEEIEKWQD PILKDEKLPE WYKFTLFNEL YFLVAGGTVW IDSSLSSADT RNGHHRSREV 480 ETTGIKVTEP QVNCNGGPDH TTTNHHNTTS SEQKENNKAF HTKCICKDES AVSRERGNLD 540 HTLDPFTFLD PLSDDVGRFL YLEGVEYIMW CTYDVHFYAS FALLALFPKI ELNIQRDFAK 600 AVLSEDGRKV RFLADGSVGI RKARGAVPHD LGTHDPWNEM NAYNIHDTSK WKDLNPKFVL 660 QVYRDFAATG DMSFGVDVWP AVRTAMEYME QFDRDDDGLV ENDGFPDQTY DAWTVHGVSA 720 YCGCLWLASL QAAAAMAMQL GDKYFAELCK SKFAKAKSAF ESKLWNGSYF NYDSGSSNNS 780 KSIQADQLAG EWYMASSGLP SLFDDVKIRS ALNKIYDFNV MKVRGGKMGA VNGMHPNGKV 840 DETCMQSREI WSGVTYAVAA TMILSGMEDK AFTTAEGIFT AGWSEEGYGY WFQTPEAWTI 900 DGHFRSLIYM RPLAIWGMQW ALSLPKAILD APKINIMERS LLSPSTRFSL IGETGVKKIA 960 TKANCLGNSV FHCSC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.007 | 574 | 714 | 150 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 3.0e-27 | 102 | 462 | 367 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-62 | 102 | 421 | 331 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 6.0e-68 | 537 | 922 | 407 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 2.0e-151 | 557 | 920 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 975 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 975 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 975 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 975 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 975 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 699 | 976 | 0 |
| HO779860 | 148 | 553 | 700 | 0 |
| GT045437 | 318 | 117 | 434 | 0 |
| HO779860 | 78 | 416 | 493 | 1e-24 |
| GT045437 | 29 | 429 | 457 | 0.00002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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