| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.011G160300.1 |
| Family | GH116 |
| Protein Properties | Length: 970 Molecular Weight: 108285 Isoelectric Point: 7.1686 |
| Chromosome | Chromosome/Scaffold: 11 Start: 29340605 End: 29352103 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 551 | 913 | 0 |
| GRFLYLEGVEYIMWCTYDVHFYASFALLELFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNS KFVLQVYRDFAATGDMAFGIEVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAQRLGDKFFAETCKTKFFSA KSAFEKKLWNGSYFNYDSGSSSNSKSIQADQLAGQWYTSSSGLGPIFDEFKTRSSLQKIFDFNVMKVKGGRMGAVNGMHPNGKVDESCMQSREVWTGVTY AVAANMLLAGMEEEAFTTAEGIFIAGWSEEGFGYWFQTPEGWTTNGHYRSLIYMRPLAIWSMQ | |||
| Full Sequence |
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| Protein Sequence Length: 970 Download |
| MVTGNLFHSK KNSWPPEEYV SRNTLQLFNF DSAAPPKQAW RRRLNSHANI LKEFSVTFME 60 AIQMVRLGIR LWSYVREEAS HGRKAPIDPF TRESCKPSAS QGVPLGGMGS GSISRGFRGE 120 FRQWQIIPGT CNISPVMANQ FSIFISRDGG NKKYASVLAP GQHEGLGKTS DEGISSWGWN 180 LNGQHSTYHA LFPRAWTIYD GEPDPDLKVS CRQISPFVPH DYRDSSLPTA VFVYTLVNTG 240 KERAKVSLLF TWANSIGGIS HLSGDHVNEP FIGEDGVSGV LLHHKTAKGN PPVTFAVAAS 300 ETQNVNVTVL PCFGLTEGSF ITARKIWGKM MQDGQFDREN FNIGPSMPSS PGETLCAAVS 360 ASAWVEPHGK CTIAFALAWS SPKIKFSKGS SYHRRYTKFY GTSERAAVDL VHDALTNYKH 420 WEEEIEKWQS PILEDIRLPE WYKFTLFNEL YFLVAGGTVW IDSSSPSADV KSDQDPPIKV 480 ESKNIKVAEA EMNCRHSTGF EHTSTSGCNS STGVGLKQNG SSTIPRKKRS CKHFSHHLKT 540 EDQLDGNEDV GRFLYLEGVE YIMWCTYDVH FYASFALLEL FPKIELNIQR DFAKAVLSED 600 GRKVKFLAEG NYGIRKVRGA VPHDLGTHDP WNEMNAYNIH DTSKWKDLNS KFVLQVYRDF 660 AATGDMAFGI EVWPAVRTAM EYMEQFDRDD DGLIENDGFP DQTYDAWTVH GVSAYCGCLW 720 LAALQAAAAM AQRLGDKFFA ETCKTKFFSA KSAFEKKLWN GSYFNYDSGS SSNSKSIQAD 780 QLAGQWYTSS SGLGPIFDEF KTRSSLQKIF DFNVMKVKGG RMGAVNGMHP NGKVDESCMQ 840 SREVWTGVTY AVAANMLLAG MEEEAFTTAE GIFIAGWSEE GFGYWFQTPE GWTTNGHYRS 900 LIYMRPLAIW SMQWVLSPPK AIIEAPKINM MDRIVISPAT FSLSLPETRV RKIANKTACF 960 GNSSLQCTC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.001 | 618 | 708 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 1.0e-29 | 102 | 462 | 367 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 4.0e-58 | 547 | 916 | 389 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-67 | 102 | 421 | 330 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 1.0e-146 | 551 | 914 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 969 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 969 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 969 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 969 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 969 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 693 | 970 | 0 |
| HO779860 | 150 | 545 | 694 | 0 |
| HO779860 | 105 | 416 | 520 | 0 |
| GT045437 | 318 | 117 | 434 | 0 |
| GT045437 | 29 | 429 | 457 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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