| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os08g01940.2 |
| Family | GH116 |
| Protein Properties | Length: 915 Molecular Weight: 99815.7 Isoelectric Point: 6.4366 |
| Chromosome | Chromosome/Scaffold: 8 Start: 580197 End: 586458 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 489 | 850 | 0 |
| GQVLYLEGMEYNMWNTYDVHFYASFALLSLFPELELNLQRDFVRGVLLHDPCLRRTLDGATVARKVLGAVPHDMGLNDPWFEVNAYMLHDPVRWKDLNPK FVLQVYRDVVATGNAGFAEAAWPAVYLAMAYMDQFDRDGDGMVENEGRPDQTYDLWSVSGVSAYTGGLWVAALQAAAAMAGIVGDGAAEAYFRGRYHRAR RVYTDELWNGGYFNYDNSGGATSSSIQADQLAGQWYARACGLEPIVDGDKARRALATVLDYNVMRVKGGAIGAVNGMRPDGAVDASSTQSKEVWPGVTYA VAAAMIHEGMPEAAFKTAKGIHDAGWGKHGFGYAFQTPESWTADGGYRALHYMRPLGVWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 915 Download |
| MDCEKPPAIS WERTFDDEGK KVAMFSMTLN DMMAIVPLMI KMLGLNLKDN AKGLASVYDP 60 LKKWMDNCYR GVPLGGIGAG SIGRSYRGYF QQFQIFPSIY EEKPILANQF SAFISRPDGK 120 RYSTVLSAPN ADVLKGIDKA GIGSWDWKLK EKNCTYHGLF PRSWTVYNGE PDPEIKITCR 180 QISPFIPHNY KESSFPVAVF TFTLHNSGST PADVTLLFTW ANSVGGKSEL TGNHKNSRMT 240 TADGRPPVTF AIASRETDGV RVTGCPRFTM GPSNSGDVTA KDMWDQINKN GSFVGDGNAA 300 AAATGASRPG SSIGAAVAAT TTVAAGGARA VSFALSWSCP EVKFPAGRTY HRRYTKFHGT 360 DRDAAAERLA HDALLEHMKW ESQIEEWQRP ILQDKSLPEW YPITLFNELY YLNAGGTIWT 420 DGQPPKNTSL SSATEPFNLD TFSTVANGGS AVDGILSTVA VAAARSNTAA AAAAAMGTAL 480 LRDGEENVGQ VLYLEGMEYN MWNTYDVHFY ASFALLSLFP ELELNLQRDF VRGVLLHDPC 540 LRRTLDGATV ARKVLGAVPH DMGLNDPWFE VNAYMLHDPV RWKDLNPKFV LQVYRDVVAT 600 GNAGFAEAAW PAVYLAMAYM DQFDRDGDGM VENEGRPDQT YDLWSVSGVS AYTGGLWVAA 660 LQAAAAMAGI VGDGAAEAYF RGRYHRARRV YTDELWNGGY FNYDNSGGAT SSSIQADQLA 720 GQWYARACGL EPIVDGDKAR RALATVLDYN VMRVKGGAIG AVNGMRPDGA VDASSTQSKE 780 VWPGVTYAVA AAMIHEGMPE AAFKTAKGIH DAGWGKHGFG YAFQTPESWT ADGGYRALHY 840 MRPLGVWAMQ WALSPPVLHK EHRVAAVAAS PEDAALGQEK FDKVASMLRL PEEQQHKGIL 900 RALYDTLRQL LLPS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-29 | 66 | 421 | 368 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 8.0e-53 | 71 | 374 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-58 | 488 | 853 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 4.0e-140 | 489 | 851 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0004348 | glucosylceramidase activity |
| GO:0005773 | vacuole |
| GO:0006629 | lipid metabolic process |
| GO:0006665 | sphingolipid metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99037.1 | 0 | 1 | 911 | 23 | 956 | hypothetical protein [Arabidopsis thaliana] |
| GenBank | EEE67921.1 | 0 | 1 | 914 | 15 | 919 | hypothetical protein OsJ_25789 [Oryza sativa Japonica Group] |
| RefSeq | NP_001060825.1 | 0 | 1 | 914 | 15 | 928 | Os08g0111200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002444904.1 | 0 | 1 | 913 | 15 | 928 | hypothetical protein SORBIDRAFT_07g001140 [Sorghum bicolor] |
| RefSeq | XP_002528846.1 | 0 | 1 | 910 | 25 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CB624698 | 253 | 332 | 584 | 0 |
| EE024511 | 289 | 553 | 840 | 0 |
| DR806818 | 289 | 553 | 840 | 0 |
| CB625769 | 279 | 418 | 696 | 0 |
| EG376486 | 266 | 1 | 253 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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