| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10003517 |
| Family | GH116 |
| Protein Properties | Length: 1039 Molecular Weight: 116747 Isoelectric Point: 6.8719 |
| Chromosome | Chromosome/Scaffold: 144 Start: 58286 End: 66036 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 528 | 886 | 0 |
| GNFLYLEGSEYLMFNTYDVHFYSSFAILMLFPKLELNFQRGFAAAVMMHDPTKMQIMSDGRVVQKKMLGAVPHDMGLNDPWFEMNAYNLFSTARWKDLNP KFVLQIYRDIVATGDMGFARAVWPSVYMAMAYMEQFDKDEDGMIENEGFPDQTYDAWPVHGVSSYCGGLWVAALQATSALARVIGEEDSARYFWIRYLEA KGVYEKLWNGSYFNYDSSGNPSIHADQLSGQWYARATGLSPIVDEEKVKSVLEKIYNYNVMKYKGGTRGAVNGMLPDGKVDTSGMQSKEIWPGVTYALAA SMIQEQMADIGFNTAFGVYQAAWSESGLGYSFQVPEGWNTDEKYRSLCYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 1039 Download |
| MAIENGFLEE QDNNKAVATK MVNPGKPPAL TWQRKLKDEP VPPLPFSLAL KDIAHMLPIG 60 VRLIRHTKAE AAKGRETIFD FLRTHHVTGD HGVPLGGIGT GSIGRSYKGE FQNFKLLPLV 120 HEEKPVLANQ FSAFVSRPDG TKSSSVLCSR KPEFPAKPGS GIESWDWNLA GDKSTYHALF 180 PRAWTSYDGE PDPDLKIVSR QMSPFIPHNY KESSFPITVF TFTLYNTGKT SADVTLLFTW 240 ANSLGGQSGF TGQHYNTKMK TKDRVHGVTL NHKTAKGHPQ LTFAMAAQET DDVRVSECPY 300 FLVSGPSKSN GITAKDMWDE IKTHGTFDNL RCKNLPSEPG SSIGAAISAS ITVPSGSVKT 360 VTFSLAWDSP EVKFSGKSYY RRYTKFYSSL GDAAAKLARD AILDHADWEA QIEAWQNPIL 420 EDKRLPEWYP VTLFNELYYL NAGGTIWTDG SLPLQSLTSI RDRKFSLDGS VLETKHQHNN 480 HATKKNDTAV EILERMVSTY EQMNDRTTSS SNPAFGTYLM NRGEENVGNF LYLEGSEYLM 540 FNTYDVHFYS SFAILMLFPK LELNFQRGFA AAVMMHDPTK MQIMSDGRVV QKKMLGAVPH 600 DMGLNDPWFE MNAYNLFSTA RWKDLNPKFV LQIYRDIVAT GDMGFARAVW PSVYMAMAYM 660 EQFDKDEDGM IENEGFPDQT YDAWPVHGVS SYCGGLWVAA LQATSALARV IGEEDSARYF 720 WIRYLEAKGV YEKLWNGSYF NYDSSGNPSI HADQLSGQWY ARATGLSPIV DEEKVKSVLE 780 KIYNYNVMKY KGGTRGAVNG MLPDGKVDTS GMQSKEIWPG VTYALAASMI QEQMADIGFN 840 TAFGVYQAAW SESGLGYSFQ VPEGWNTDEK YRSLCYMRPL AIWGMQWALT REKVFNEGGV 900 VVVDQPFRKE EDDEEGNFED LSWYMRHHTG FKKVAKLLQV PKDESKRRCQ HQGQGVQLSY 960 HPAGRDASRS SEWAAAVSQW RSRVRFDFDV NIREFGTLTP RMQVSYTTFM VGCPKVRWVG 1020 GDPPVIVDGH RQRIGGPI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06202 | GDE_C | 0.005 | 629 | 719 | 106 | + Amylo-alpha-1,6-glucosidase. This family includes human glycogen branching enzyme. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (EC:3.2.1.33). | ||
| COG4354 | COG4354 | 4.0e-27 | 90 | 449 | 369 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 6.0e-58 | 92 | 408 | 328 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-70 | 527 | 889 | 383 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 9.0e-161 | 528 | 887 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 3 | 947 | 1 | 933 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 3 | 947 | 2 | 933 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275782.1 | 0 | 3 | 947 | 17 | 949 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325943.1 | 0 | 56 | 947 | 1 | 875 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525532.1 | 0 | 10 | 948 | 11 | 932 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GW866491 | 289 | 542 | 830 | 0 |
| GW866809 | 275 | 403 | 677 | 0 |
| DY292040 | 359 | 541 | 893 | 0 |
| GW866540 | 254 | 693 | 946 | 0 |
| GW866809 | 43 | 674 | 716 | 0.0000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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