| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G221200.3 |
| Family | GH116 |
| Protein Properties | Length: 912 Molecular Weight: 101903 Isoelectric Point: 6.6578 |
| Chromosome | Chromosome/Scaffold: 06 Start: 47398045 End: 47406251 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 493 | 855 | 0 |
| GRFLYLEGVEYIMWNTYDVHFYASFALLDLFPKIELNIQRDFAKAVLSEDGRRVKFLAEGNYGIRKVRGAVPHDLGTHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDMQFGVDVWPAVRTAMEYMEQFDRDDDGLIENDGFPDQTYDAWTVHGVSAYCGCLWLAALQAAAAMAEQIGDRFFAETCKTKFCTA KSAFEKKLWNGSYFKYDSGSSSNSKSIQADQLAGQWYTASSGLAPLFDEFKIRSALQKIYDFNVMKVKGGRMGAVNGMHLNGKVDETCMQSREIWTGVTY AVAANMILAGMEKEAFATAEGIFIAGWSEEGFGYWFQTPEAWTMDGHFRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 912 Download |
| MEAIKMVRLG IRLWSYVREE ASHGRKAPID PFTRESCKPS ASQGVPLGGM GSGSISRGFR 60 GEFRQWQIVP GTCDSSPVMA NQFSIFVSRD SGNKKYASVL APGRHEGLGK ARDEGISSWG 120 WNLSGQHSTY HALFPRAWTI YDGEPDPELK VSCRQISPFI PHNYKDTSLP TAVFVYTLVN 180 TGRERAKVSL LFTWANSIGG VSHLSGDHVN EPFIGEDGVS GVLLHHKTAK GNPPVTFAIA 240 ACETQNVNVT VLPCFGLTEG RSVTARQMWD KMMQDGQFDR QNFNSGPSMP SSPGETLCAA 300 VSASAWVEPH GKCTIAFSLA WSSPKIKFLK GSSYHRRYTK FYGTSERAAL NLAHDALTNY 360 KRWEEEIEKW QSPILNDQRL PEWYKFTLFN ELYFLVAGGT VWIDSSLPST NVKNDQDSPE 420 DAQRVDVKVT EAEVNRRHTT ISEYSTTSGC NGSTGDVLKN NSDPAVTQNK RNSNNLSEHF 480 KWQDQLDDYD DVGRFLYLEG VEYIMWNTYD VHFYASFALL DLFPKIELNI QRDFAKAVLS 540 EDGRRVKFLA EGNYGIRKVR GAVPHDLGTH DPWNEMNAYN IHDTSKWKDL NPKFVLQVYR 600 DFAATGDMQF GVDVWPAVRT AMEYMEQFDR DDDGLIENDG FPDQTYDAWT VHGVSAYCGC 660 LWLAALQAAA AMAEQIGDRF FAETCKTKFC TAKSAFEKKL WNGSYFKYDS GSSSNSKSIQ 720 ADQLAGQWYT ASSGLAPLFD EFKIRSALQK IYDFNVMKVK GGRMGAVNGM HLNGKVDETC 780 MQSREIWTGV TYAVAANMIL AGMEKEAFAT AEGIFIAGWS EEGFGYWFQT PEAWTMDGHF 840 RSLIYMRPLA IWGMQWALSI PKAILDAPKV NMMDKILISP ATFSLSLTET GVRKIANKAK 900 CFGNSVLHCA C* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 0.003 | 560 | 650 | 100 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 2.0e-30 | 44 | 404 | 365 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 4.0e-64 | 490 | 858 | 387 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 1.0e-67 | 44 | 363 | 333 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 4.0e-149 | 493 | 856 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 2 | 911 | 60 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 2 | 911 | 60 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 2 | 911 | 60 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 2 | 911 | 60 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 2 | 911 | 60 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 635 | 912 | 0 |
| HO779860 | 150 | 487 | 636 | 0 |
| HO779860 | 98 | 358 | 455 | 0 |
| GT045437 | 317 | 59 | 375 | 0 |
| GT045437 | 29 | 371 | 399 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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