Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G133800.1 |
Family | GH116 |
Protein Properties | Length: 951 Molecular Weight: 105990 Isoelectric Point: 5.7938 |
Chromosome | Chromosome/Scaffold: 13 Start: 35276291 End: 35289393 |
Description | Beta-glucosidase, GBA2 type family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH116 | 524 | 885 | 0 |
GQFLYLEGSEYLMFNTYDVHFYSSFALLMLFPKLELSFQRDFAAAVMMHDPSKMEIMYDGKWVPRKILGAVPHDIGLNDPWFEVNAYNLFNTDNWKDLNP KFVLQIHRDIVATGDKSFAQAVWPSVYTAMAFMDQFDKDRDGMIENEGFPDQTYDAWPVDGVSAYSGGLWVAALQATASIAHQVGDDEAAAYFHTKYQKA KSVYATLWNGSYFNYDNTANSSSRCILADQLAGQWYTGASGLMPIADNDKVRTALQKIYDFNVLKVKGGMCGAVNGMLPDGRVDMTGMQSREIWAGVTYA LAATMIQEGMVETAFKTAAGAHEAAWSQQGLGYSFQTPEAWNTDEEYRSLCYMRPLAIWAMQ |
Full Sequence |
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Protein Sequence Length: 951 Download |
MENGVKETLE NDFTSCSASL EVDPAKPASL TWLRQLNSIG KPPAGFGLSF KEIMDLAPIG 60 FRLWRYTREE EATGRIPIFD FFRKHLVTCD HGIPLGGIGA GSIGRGYRGE FQRFKLFGTV 120 CEEGPILANQ FSAFVSRPNG QKYSTVLCAR SPEVTKGSTG SGIESWDWNL KGEKCTYHGL 180 FPRSWTIYEG EPDPELRISC RQISPFIPHN YKESSLPVSV FTFTLSNTGR TSADVTLLFT 240 WANSVGGISG FSGDHFNSKM KMENGVRGVL LHHKTAKGQP PLTFAISAKE TNEVHVSECP 300 CFLISGNSRG ISAKDMWHEI KKNGSFENLG YEECSPSEPG SSIGAAVAAS VTVPPGSDRR 360 VTFSLAWDCP EVRFGDKTYY KRYSKYYGTV GDAAGNIASD AIFDHSTWES QIESWQRPIL 420 EDKRLPEWYP VTLFNELYYL NAGGTIWTDG SAPMQSLASL GERKFSLDKS RSHLDNAINT 480 ANHKNIAIEI LERMTSTLEK AHIPLTSNSA LGSQLLQDGE ENIGQFLYLE GSEYLMFNTY 540 DVHFYSSFAL LMLFPKLELS FQRDFAAAVM MHDPSKMEIM YDGKWVPRKI LGAVPHDIGL 600 NDPWFEVNAY NLFNTDNWKD LNPKFVLQIH RDIVATGDKS FAQAVWPSVY TAMAFMDQFD 660 KDRDGMIENE GFPDQTYDAW PVDGVSAYSG GLWVAALQAT ASIAHQVGDD EAAAYFHTKY 720 QKAKSVYATL WNGSYFNYDN TANSSSRCIL ADQLAGQWYT GASGLMPIAD NDKVRTALQK 780 IYDFNVLKVK GGMCGAVNGM LPDGRVDMTG MQSREIWAGV TYALAATMIQ EGMVETAFKT 840 AAGAHEAAWS QQGLGYSFQT PEAWNTDEEY RSLCYMRPLA IWAMQWALTN PKLSTEETKH 900 PYGEIDECLY QKQHLAFSKV AHLLKLPNKE EASKTFLQSL VQFICRRLPI * 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 0.003 | 592 | 740 | 164 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
COG4354 | COG4354 | 1.0e-24 | 161 | 449 | 299 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam12215 | GBA2_N | 2.0e-49 | 127 | 408 | 291 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
COG4354 | COG4354 | 5.0e-72 | 523 | 888 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
pfam04685 | DUF608 | 2.0e-165 | 524 | 886 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. |
Gene Ontology | |
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GO Term | Description |
GO:0004348 | glucosylceramidase activity |
GO:0006665 | sphingolipid metabolic process |
GO:0016021 | integral to membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI31319.1 | 0 | 1 | 948 | 1 | 947 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264575.1 | 0 | 2 | 948 | 3 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275782.1 | 0 | 1 | 948 | 17 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325943.1 | 0 | 56 | 948 | 1 | 889 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525532.1 | 0 | 1 | 950 | 2 | 948 | conserved hypothetical protein [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY292040 | 373 | 537 | 906 | 0 |
JG703027 | 328 | 542 | 869 | 0 |
FC917648 | 306 | 537 | 842 | 0 |
FC895322 | 303 | 397 | 699 | 0 |
DY268096 | 365 | 430 | 794 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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