Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025238m |
Family | CE8 |
Protein Properties | Length: 585 Molecular Weight: 63541 Isoelectric Point: 9.247 |
Chromosome | Chromosome/Scaffold: 7 Start: 7904865 End: 7908319 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 274 | 568 | 0 |
AVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGA TSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIA |
Full Sequence |
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Protein Sequence Length: 585 Download |
MTHIKEFFTK LSESSSNQNI SNIPKKKKKL FLALFATLLV VAAVIGIVAG VNSRKNSGDN 60 GNEPHHAILK SSCSSTRYPD LCFSAIAAVP EASKKVTSQK DVIEMSLNIT TTAVEHNYFG 120 IQKLLKRTNL TKREKVALHD CLETIDETLD ELHKAVEDLE EYPNKKSLSQ HADDLKTLMS 180 AAMTNQGTCL DGFSHDDANK HVRDALSDGQ VHVEKMCSNA LAMIKNMTDT DMMIMRTSNN 240 RKLTEETSTV DGWPAWLSPG DRRLLQSSSV TPNAVVAADG SGNFKTVAAA VAAAPQGGTK 300 RYIIRIKAGV YRENVEVTKK HKNIMFIGDG RTRTIITGSR NVVDGSTTFK SATVAVVGEG 360 FLARDITFQN TAGPSKHQAV ALRVGADLSA FYNCDMLAYQ DTLYVHSNRQ FFVNCLIAGT 420 VDFIFGNAAA VLQNCDIHAR KPNSGQKNMV TAQGRTDPNQ NTGIVIQKSR IGATSDLKPV 480 QGSFPTYLGR PWKEYSRTVI MQSSITDLIH PAGWHEWDGN FALNTLFYGE HQNSGAGAGT 540 SGRVKWKGFR VITSATEAQA FTPGSFIAGS SWLGSTGFPF SLGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 1.0e-168 | 68 | 584 | 530 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 4.0e-180 | 63 | 584 | 526 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 66 | 584 | 531 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 273 | 570 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 65 | 584 | 522 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB57670.1 | 0 | 1 | 584 | 1 | 584 | pectinesterase [Citrus sinensis] |
Swiss-Prot | O04886 | 0 | 1 | 584 | 1 | 584 | PME1_CITSI RecName: Full=Pectinesterase 1; Short=PE 1; AltName: Full=Pectin methylesterase; Flags: Precursor |
Swiss-Prot | P83948 | 0 | 1 | 584 | 1 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265171.1 | 0 | 1 | 584 | 31 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 62 | 584 | 56 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 266 | 584 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 270 | 584 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-30 | 269 | 559 | 1 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-30 | 269 | 559 | 1 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-29 | 269 | 559 | 1 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |