Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10026774m |
Family | CE8 |
Protein Properties | Length: 319 Molecular Weight: 35353.4 Isoelectric Point: 9.8597 |
Chromosome | Chromosome/Scaffold: 1 Start: 4593237 End: 4594746 |
Description | methylesterase PCR A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 303 | 0 |
NIVVAKDGSGNVKTLKEAIAAAPDNSKTRYVIYVKKGIYDEVVNIRKTNLTIVGDGKNLTILTGNLNPKDGAIGTFDTATLAVDGDGFLAQDICIRNTAG PTKGQTVALRVSSDRVVIHRCRIEAFQDTLYAHSHRQFYRGCYITGTIDFICGDATAVFQYCQIEPRNPIRSHTNIITAQKWNDTSESTGFVFQKCNITA SKDLVPIKKKVKTYLGRPWGRLSRVVFMESFIDDLIEPEGYKPMTSDVKRLSTLSYREYKNTGPGADTSKRVKWKGFKVITDPKEAAKFTVGKFLQG |
Full Sequence |
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Protein Sequence Length: 319 Download |
DLKRNANIVV AKDGSGNVKT LKEAIAAAPD NSKTRYVIYV KKGIYDEVVN IRKTNLTIVG 60 DGKNLTILTG NLNPKDGAIG TFDTATLAVD GDGFLAQDIC IRNTAGPTKG QTVALRVSSD 120 RVVIHRCRIE AFQDTLYAHS HRQFYRGCYI TGTIDFICGD ATAVFQYCQI EPRNPIRSHT 180 NIITAQKWND TSESTGFVFQ KCNITASKDL VPIKKKVKTY LGRPWGRLSR VVFMESFIDD 240 LIEPEGYKPM TSDVKRLSTL SYREYKNTGP GADTSKRVKW KGFKVITDPK EAAKFTVGKF 300 LQGNLWINST GVPYDNGF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 2.0e-122 | 1 | 318 | 320 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 1.0e-129 | 7 | 313 | 309 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 1.0e-149 | 2 | 318 | 319 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-155 | 5 | 317 | 315 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-166 | 7 | 304 | 300 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA96434.1 | 0 | 6 | 318 | 4 | 315 | pectin methylesterase [Nicotiana plumbaginifolia] |
RefSeq | NP_172624.1 | 0 | 2 | 314 | 241 | 553 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 2 | 318 | 210 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 2 | 314 | 241 | 553 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
Swiss-Prot | Q96575 | 0 | 6 | 318 | 236 | 548 | PME22_SOLLC RecName: Full=Pectinesterase 2.2; Short=PE 2.2; AltName: Full=Pectin methylesterase 2.2; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 6 | 318 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 7 | 318 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 9e-27 | 7 | 301 | 5 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 9e-27 | 7 | 301 | 5 | 334 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 9e-27 | 7 | 301 | 5 | 334 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777316 | 318 | 5 | 319 | 0 |
EB452110 | 281 | 10 | 288 | 0 |
DV711860 | 295 | 6 | 298 | 0 |
JG606995 | 306 | 16 | 319 | 0 |
GO241843 | 279 | 16 | 292 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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