Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr1g008140.1 |
Family | CE8 |
Protein Properties | Length: 610 Molecular Weight: 66886.8 Isoelectric Point: 9.3691 |
Chromosome | Chromosome/Scaffold: 1 Start: 1315083 End: 1318675 |
Description | pectin methylesterase PCR fragment F |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 295 | 592 | 0 |
IIVSKSGGNGTVKTITEAIKKAPEHSRRRFIIYVRAGRYEENNLKVGKKKTNIMFIGDGRGKTVITGKRSVGDGMTTFHTASFAASGPGFMARDITFENY AGPEKHQAVALRVGSDHAVVYRCNIVGYQDACYVHSNRQFFRECNIYGTVDFIFGNAAVVFQKCNIYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRI LPAPDLASSKGSIETYLGRPWKMYSRTVYMLSYMGDHVHPHGWLEWNGDFALKTLYYGEYMNFGPGAAIGQRVKWPGYRVITSTLEANRYTVAQFISG |
Full Sequence |
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Protein Sequence Length: 610 Download |
MDFDRLGPSD PGGSSRRSTA PLTPSTTSNS SPKSNKKLIM LSILAAVLII ASAISAALIT 60 VVRSRASSNN SNLLHSKPTQ AISRTCSKTR YPSLCINSLL DFPGSTSASE QELVHISFNM 120 THRHISKALF ASSGLSYTVA NPRVRAAYED CLELMDESMD AIRSSMDSLM TTSSTLSNDD 180 GESRQFSNVA GSTEDVMTWL SAALTNQDTC LEGFEDTSGT VKDQMVGNLK DLSELVSNSL 240 AIFSASGDND FTGVPIQNKR RLMGMSDISR EFPKWLEKRD RRLLSLPVSE IQADIIVSKS 300 GGNGTVKTIT EAIKKAPEHS RRRFIIYVRA GRYEENNLKV GKKKTNIMFI GDGRGKTVIT 360 GKRSVGDGMT TFHTASFAAS GPGFMARDIT FENYAGPEKH QAVALRVGSD HAVVYRCNIV 420 GYQDACYVHS NRQFFRECNI YGTVDFIFGN AAVVFQKCNI YARKPMAQQK NTITAQNRKD 480 PNQNTGISIH DCRILPAPDL ASSKGSIETY LGRPWKMYSR TVYMLSYMGD HVHPHGWLEW 540 NGDFALKTLY YGEYMNFGPG AAIGQRVKWP GYRVITSTLE ANRYTVAQFI SGSSWLPSTG 600 VAFLAGLST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 4.0e-173 | 81 | 607 | 529 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 3.0e-176 | 143 | 607 | 466 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 74 | 608 | 541 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 294 | 593 | 300 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 75 | 607 | 535 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42038.1 | 0 | 1 | 608 | 1 | 616 | pectin methylesterase 1 [Pyrus communis] |
RefSeq | NP_200149.1 | 0 | 1 | 608 | 1 | 586 | PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002278061.1 | 0 | 63 | 608 | 57 | 596 | PREDICTED: similar to pectin methylesterase 1 [Vitis vinifera] |
RefSeq | XP_002317777.1 | 0 | 62 | 607 | 15 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321999.1 | 0 | 1 | 608 | 1 | 604 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 296 | 607 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 291 | 607 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-22 | 296 | 598 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-22 | 296 | 598 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-22 | 296 | 598 | 7 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |