Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10013344 |
Family | CE8 |
Protein Properties | Length: 554 Molecular Weight: 59943.1 Isoelectric Point: 8.6597 |
Chromosome | Chromosome/Scaffold: 812 Start: 236015 End: 240899 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 242 | 537 | 0 |
NVVVAADGSGNFRTVSQAVAAAPEGSTSRYVIRIKAGVYRETLVVPKKKTNLMFVGDGRTSTIITGSMNVVDGSTTFNSATVAVVGDRFMARDLTFQNTA GPSKHQAVALRVNADFTAFYRCDMLAYQDTLYVHSLRQFYVSCFIAGTVDFIFGNAAVVLQNCDIHARRPNSGQRNMVTAQGRDDPNQNTGIVIQKCRIG ATQDLLQVQSSVESYLGRPWKMYSRTVIMQTDISNVIRPAGWFMWDGNFALATLTYREYANTGAGSGTSGRVRWGGYKVITSASEAQPFAPRSFIG |
Full Sequence |
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Protein Sequence Length: 554 Download |
MAWSESNRTK NIFLLLTFSA AILITATTAT VHHAVIKSSC STTLYPELCH SAASASAAVL 60 SDIKTTTDVV DLSLNATIAA VQANNQAIKK IISSRSLSLT KREKAALADC IELCGETMDE 120 LVKTIEELHG KKKSAAERGE DLKTLLSAAM TNQETCLDGF SHDKGDKKVR ELLAAGQTNV 180 GRMCSNSLAM VKNITEEEVF REGKTASFLS EGRKMGEEED GWPRWISAGD RRLLQAGTVT 240 PNVVVAADGS GNFRTVSQAV AAAPEGSTSR YVIRIKAGVY RETLVVPKKK TNLMFVGDGR 300 TSTIITGSMN VVDGSTTFNS ATVAVVGDRF MARDLTFQNT AGPSKHQAVA LRVNADFTAF 360 YRCDMLAYQD TLYVHSLRQF YVSCFIAGTV DFIFGNAAVV LQNCDIHARR PNSGQRNMVT 420 AQGRDDPNQN TGIVIQKCRI GATQDLLQVQ SSVESYLGRP WKMYSRTVIM QTDISNVIRP 480 AGWFMWDGNF ALATLTYREY ANTGAGSGTS GRVRWGGYKV ITSASEAQPF APRSFIGGAS 540 WLPATGFPFA LDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 2.0e-162 | 105 | 553 | 472 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 2.0e-166 | 106 | 553 | 454 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 37 | 553 | 528 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 242 | 538 | 297 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 103 | 549 | 450 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69696.1 | 0 | 1 | 553 | 1 | 553 | AF355057_1 putative pectin methylesterase LuPME5 [Linum usitatissimum] |
GenBank | AAK84485.1 | 0 | 35 | 553 | 110 | 631 | putative thermostable pectinesterase [Citrus sinensis] |
Swiss-Prot | P83948 | 0 | 32 | 553 | 65 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265171.1 | 0 | 30 | 553 | 91 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324773.1 | 0 | 31 | 553 | 52 | 573 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 235 | 553 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 239 | 549 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-24 | 240 | 514 | 3 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-24 | 240 | 514 | 3 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 3e-24 | 240 | 514 | 3 | 318 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |