Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.013G013200.1 |
Family | CE8 |
Protein Properties | Length: 541 Molecular Weight: 60641.1 Isoelectric Point: 8.7209 |
Chromosome | Chromosome/Scaffold: 13 Start: 860828 End: 862785 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 237 | 523 | 0 |
AIVALDGSGHYRTITEAINEAPSYRTRRYIIYVKTGVYRENIDMKRKKSYIMLVGDGIGKTVVTGNRNFMQGWTTFRTATVAVSGKGFIARDMTFRNTAG PLNHQAVALRVDSDQSAFYRCSMEGYQDTLYAHSLRQFYRECEIHGTIDYIFGNGAAVFQECKIYTRVPLPLQKVTITAQGRKNPHQSTGFSIQNSYIFA SQPTYLGRPWKQYSRTVFMNTYMSALVQPRGWLEWYGNFALGTLWYGEYRNRGPGALLSGRVKWPGYHIIQDARTAKFFTVTQFIDG |
Full Sequence |
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Protein Sequence Length: 541 Download |
MMALANFLFI LFLLPSLEAL SNVIPSEEQE LNTQALILQA CSNVENLSSC LSNFQAELQK 60 SGPPTAQSII HAALRATLDE ARRAIDTITK FNSLSISYRE QVAIEDCKEL LDFSVSELAW 120 SLMEMNKIRA GIKNVHYEGN LKAWLSAALS NPDTCLEGFE GTDRHLENFI SGSIKQVTQL 180 IGNVLGLYTQ LHSLPFKPTR NDNATTPKSS SDKFPEWMTE GDQELLKGSS LGMHVDAIVA 240 LDGSGHYRTI TEAINEAPSY RTRRYIIYVK TGVYRENIDM KRKKSYIMLV GDGIGKTVVT 300 GNRNFMQGWT TFRTATVAVS GKGFIARDMT FRNTAGPLNH QAVALRVDSD QSAFYRCSME 360 GYQDTLYAHS LRQFYRECEI HGTIDYIFGN GAAVFQECKI YTRVPLPLQK VTITAQGRKN 420 PHQSTGFSIQ NSYIFASQPT YLGRPWKQYS RTVFMNTYMS ALVQPRGWLE WYGNFALGTL 480 WYGEYRNRGP GALLSGRVKW PGYHIIQDAR TAKFFTVTQF IDGMSWLPST GIKFTVGLGN 540 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 1.0e-161 | 69 | 538 | 484 | + pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 9.0e-174 | 33 | 538 | 521 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 0 | 2 | 540 | 540 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02201 | PLN02201 | 0 | 36 | 538 | 524 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 236 | 524 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_187213.1 | 0 | 7 | 540 | 7 | 543 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002279144.1 | 0 | 5 | 540 | 7 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318977.1 | 0 | 2 | 540 | 1 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330224.1 | 0 | 38 | 540 | 1 | 502 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512462.1 | 0 | 31 | 540 | 29 | 535 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 236 | 538 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 229 | 538 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1qjv_B | 6e-25 | 247 | 495 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-25 | 247 | 495 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-25 | 247 | 495 | 18 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |