Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G051400.1 |
Family | CE8 |
Protein Properties | Length: 574 Molecular Weight: 63461.7 Isoelectric Point: 8.2024 |
Chromosome | Chromosome/Scaffold: 18 Start: 5332688 End: 5341678 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 262 | 558 | 0 |
NVVVAADGSGNYRTVSEAVAAAPERSSSRYIIRIKAGVYRENVDVPRSKTNIMFMGDGRTTTIITASRNVVDGSTTFNSATVAAVGDGFLARDITFQNSA GPSKHQAVAIRVGSDLSAFYRCDMIAYQDTLYVHSLRQFYVSCIIIGSVDFIFGNAAVVFQDCDIHARRPNPGQKNMVTAQGRSDPNENTGIVIQKCRIG ATQDLLAAKSSFRSYLGRPWKLYSRTIVMQTEISDIIDPAGWFEWDGDFALDTLVYREYQNTGPGANTANRVNWKGFKVVTSAIEVQPFIARNFIRG |
Full Sequence |
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Protein Sequence Length: 574 Download |
MSSSDNHNTL KNKKRLFLSL FSSILLVTAI VSIVAGVTSS KNSTESNNDH QVAHTILKSS 60 CSSTLYPHLC FSALSAVPDA TSKIKSKKDV IDLSLNRTMS ATRHSYFKIQ KLTSTRRSFT 120 ERENTALHDC LVMLNETLDQ LSKAYQELQD YPSLKKSLSV HADDLKILLS AAMTNQETCL 180 DGFSHDKADK KVRELFIDEE MHVYHMSSIA LAIIKNVTDT DMAKEQSLSS GRKLEEENGT 240 EWPEWLSAGD RRLLQATTVT PNVVVAADGS GNYRTVSEAV AAAPERSSSR YIIRIKAGVY 300 RENVDVPRSK TNIMFMGDGR TTTIITASRN VVDGSTTFNS ATVAAVGDGF LARDITFQNS 360 AGPSKHQAVA IRVGSDLSAF YRCDMIAYQD TLYVHSLRQF YVSCIIIGSV DFIFGNAAVV 420 FQDCDIHARR PNPGQKNMVT AQGRSDPNEN TGIVIQKCRI GATQDLLAAK SSFRSYLGRP 480 WKLYSRTIVM QTEISDIIDP AGWFEWDGDF ALDTLVYREY QNTGPGANTA NRVNWKGFKV 540 VTSAIEVQPF IARNFIRGAS WLPSTGFPYS FDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-161 | 11 | 573 | 567 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 3.0e-168 | 4 | 569 | 582 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-179 | 29 | 570 | 544 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 11 | 573 | 575 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 268 | 558 | 291 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002265171.1 | 0 | 1 | 573 | 41 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273402.1 | 0 | 47 | 573 | 46 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 54 | 573 | 60 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324773.1 | 0 | 1 | 573 | 1 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516186.1 | 0 | 47 | 573 | 58 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 255 | 573 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 259 | 569 | 1 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 9e-21 | 256 | 481 | 1 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 9e-21 | 256 | 481 | 1 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 9e-21 | 256 | 481 | 1 | 245 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |