Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma17g24815.1 |
Family | CE8 |
Protein Properties | Length: 246 Molecular Weight: 28160.3 Isoelectric Point: 10.1309 |
Chromosome | Chromosome/Scaffold: 17 Start: 25354836 End: 25356094 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 15 | 245 | 0 |
IVVAKDGSGKYKKKFDALKHVLNKSNKRTMIYVKKGVYYENVRVEKTRWNVMIIGDGMTSTIVSGSRNFGWNTNIFNSNIWNFIAGDMGFRNTIGPQKHQ AVALMTSSDQVVYYRCHIDAYQNTLYAHSNCQFYRECNIYGTIDFIFGNFAVVIQNCNIRPKLPMHDQINTITAQEKTDPNMNTGISIQHCNISPFGNLS SVETYLGRPWKNYSTTLYMRSRMDGLVSPRG |
Full Sequence |
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Protein Sequence Length: 246 Download |
RKLLLTKDLR KKDHIVVAKD GSGKYKKKFD ALKHVLNKSN KRTMIYVKKG VYYENVRVEK 60 TRWNVMIIGD GMTSTIVSGS RNFGWNTNIF NSNIWNFIAG DMGFRNTIGP QKHQAVALMT 120 SSDQVVYYRC HIDAYQNTLY AHSNCQFYRE CNIYGTIDFI FGNFAVVIQN CNIRPKLPMH 180 DQINTITAQE KTDPNMNTGI SIQHCNISPF GNLSSVETYL GRPWKNYSTT LYMRSRMDGL 240 VSPRG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 4.0e-92 | 15 | 245 | 245 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-95 | 15 | 245 | 240 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-108 | 15 | 245 | 236 | + pectinesterase | ||
pfam01095 | Pectinesterase | 4.0e-122 | 14 | 245 | 241 | + Pectinesterase. | ||
PLN02468 | PLN02468 | 1.0e-129 | 15 | 245 | 236 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI29155.1 | 0 | 1 | 245 | 241 | 491 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273396.1 | 0 | 1 | 245 | 244 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311918.1 | 0 | 1 | 245 | 250 | 498 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316458.1 | 0 | 1 | 245 | 250 | 499 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515781.1 | 0 | 1 | 245 | 254 | 503 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 14 | 245 | 8 | 248 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 16 | 245 | 6 | 244 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000008 | 16 | 236 | 34 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000002 | 114 | 236 | 129 | 255 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000002 | 114 | 236 | 129 | 255 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR047978 | 240 | 15 | 245 | 0 |
CO483304 | 241 | 14 | 245 | 0 |
CO475715 | 241 | 14 | 245 | 0 |
EL470553 | 237 | 14 | 245 | 0 |
DR166669 | 240 | 15 | 245 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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