Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.002G176100.1 |
Family | CE8 |
Protein Properties | Length: 523 Molecular Weight: 56965.4 Isoelectric Point: 8.5279 |
Chromosome | Chromosome/Scaffold: 02 Start: 44929915 End: 44932377 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 215 | 506 | 0 |
DIVVAQDGSGNFKTISEAVAAAGGAKRTVIHVKAGVYNENVDIQRSARNIMLIGDGIGATVVTGNKNAQTTTTFRTATFAVVGDGFIARDITFENTAGPQ KHQAVALRSGSDFSVFYRCSFEGYQDTLYVYSQRQFYRDCDIYGTVDFIFGDAVAVFQNCNIYIRRPMNSQINTITAQARTDPNENTGIIVHNSRVTAAS DLRAVQGSFKNYLGRPWQKYSRTVFMKTGLDGLIEAEGWLPWSGNFGLSSLYYAEHMNTGVGASTGGRVKWGGYHVIDAVEAEKFTVGNFLA |
Full Sequence |
---|
Protein Sequence Length: 523 Download |
MDKLLALPFL ITYFFTCVPL GNAAATITSC TQTPYPDVCN HFMGNGVNVA TSSLALDQTR 60 FSFRDLAIQV TLNQAVQAHR LVSTMDLTSF NERAKLAWND CLELYQNTIS HLNRSKSTNS 120 PLDAQTWLSA AIANHQTCQN GFIDFNLASH LQTLPPMLAN FSKLISNSLA INKPTISVTA 180 KQVGNRRLFA HGFPTWLSGA DRKLLQKIGA PLNADIVVAQ DGSGNFKTIS EAVAAAGGAK 240 RTVIHVKAGV YNENVDIQRS ARNIMLIGDG IGATVVTGNK NAQTTTTFRT ATFAVVGDGF 300 IARDITFENT AGPQKHQAVA LRSGSDFSVF YRCSFEGYQD TLYVYSQRQF YRDCDIYGTV 360 DFIFGDAVAV FQNCNIYIRR PMNSQINTIT AQARTDPNEN TGIIVHNSRV TAASDLRAVQ 420 GSFKNYLGRP WQKYSRTVFM KTGLDGLIEA EGWLPWSGNF GLSSLYYAEH MNTGVGASTG 480 GRVKWGGYHV IDAVEAEKFT VGNFLAGNAW IPGTGVPFDV GL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 7.0e-161 | 68 | 522 | 465 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 3.0e-164 | 4 | 522 | 561 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02916 | PLN02916 | 3.0e-166 | 88 | 522 | 453 | + pectinesterase family protein | ||
PLN02484 | PLN02484 | 2.0e-166 | 29 | 522 | 520 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-180 | 215 | 508 | 298 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77092.1 | 0 | 1 | 522 | 1 | 507 | hypothetical protein [Vitis vinifera] |
EMBL | CAN83663.1 | 0 | 30 | 522 | 28 | 512 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002265599.1 | 0 | 30 | 522 | 28 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314796.1 | 0 | 1 | 522 | 1 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527782.1 | 0 | 1 | 522 | 1 | 529 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 212 | 522 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 214 | 522 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-25 | 213 | 512 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-25 | 213 | 512 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-25 | 213 | 512 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |