Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10028546m |
Family | CE8 |
Protein Properties | Length: 567 Molecular Weight: 62884.8 Isoelectric Point: 9.2356 |
Chromosome | Chromosome/Scaffold: 3 Start: 1109109 End: 1111664 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 252 | 547 | 0 |
VTVNQNGTGNFTTITEAVTAAPNKTDGSAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINQTIITGNRSVVDGWTTFNSATFAVTSPNFVAVNITFRN TAGPEKHQAVALRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRQPLQNQFNAITAQGRTDPNQNTGTSIHNCT IRPAGDLVSSNYTVKTYLGRPWKEYSRTVFMQSYMDGFVEPVGWREWNGDFALSTLYYGEYNNTGSGSNTTNRVVWPGYHVINSTDASNFTVSNFL |
Full Sequence |
---|
Protein Sequence Length: 567 Download |
MASPKLFLVT LFLSLQTLFI ASQTLLPSSN PSSTICKTTP DPKFCKSVFP QTSQGDVRDY 60 GRFSLRKSLT QSRKFTRTID KHLKRNNGLL SQSAVRALQD CRDLASLTTD YLITSFETVN 120 VTTSSKTLSF SKADDIQTLL SAALTNEQTC LDGVNTAASS SWTIRNGVAL PLINDTKLFS 180 VSLALFTKGW VPKKKKQHYS WAHSRTKPVR HFRNGALPLK MTERTRAVYE SLSRRKLADE 240 NDGNTVLVSD IVTVNQNGTG NFTTITEAVT AAPNKTDGSA GYFVIYVTSG VYEENVVIAK 300 NKRYLMMIGD GINQTIITGN RSVVDGWTTF NSATFAVTSP NFVAVNITFR NTAGPEKHQA 360 VALRSSADLS IFYSCSFEAY QDTLYTHSLR QFYRECDIYG TVDFIFGNAA VVLQNCNLYP 420 RQPLQNQFNA ITAQGRTDPN QNTGTSIHNC TIRPAGDLVS SNYTVKTYLG RPWKEYSRTV 480 FMQSYMDGFV EPVGWREWNG DFALSTLYYG EYNNTGSGSN TTNRVVWPGY HVINSTDASN 540 FTVSNFLFGD EWMVQSGVPY LAGLLS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-144 | 22 | 560 | 547 | + pectinesterase | ||
PLN02301 | PLN02301 | 1.0e-146 | 5 | 564 | 573 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-178 | 252 | 550 | 300 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 2 | 566 | 570 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 31 | 565 | 551 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL87311.1 | 0 | 1 | 566 | 1 | 573 | unknown protein [Arabidopsis thaliana] |
DDBJ | BAF00855.1 | 0 | 1 | 566 | 1 | 579 | hypothetical protein [Arabidopsis thaliana] |
RefSeq | NP_563662.1 | 0 | 1 | 566 | 1 | 579 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_567227.1 | 0 | 1 | 566 | 1 | 573 | ATPMEPCRB; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002523112.1 | 0 | 27 | 565 | 33 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 254 | 564 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 252 | 564 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-21 | 251 | 519 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-21 | 251 | 519 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-21 | 251 | 519 | 7 | 311 | A Chain A, Pectin Methylesterase From Carrot |