Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G114200.1 |
Family | CBM43 |
Protein Properties | Length: 457 Molecular Weight: 49786.4 Isoelectric Point: 5.9599 |
Chromosome | Chromosome/Scaffold: 02 Start: 16117335 End: 16119726 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 451 | 1.9e-31 |
WCVAKPHADEKVLQTVLDFCCGPGGVDCREVYESGKCFEPDKLHAHASYAMNAYYQMHGRNYWNCDFKGTGLVTFSDPSYGTC | |||
GH17 | 23 | 342 | 0 |
VGINYGTLGNNLPSPKKVAQLLQSTLIDKVKIYDTNPDILEAFSNTGIDLIVAVENYHVANISKDAAAADDWFATRVQPFIPATSIVAVCVGNEYLTSDD NLDPDALVQAMQNLHAVLLKRGLDRKIKVTTPHSMAVLASSFPPSASTFATKLIPTMSSIVGFLADTGAPFMVNAYPYFAYRDNPSTVDLEYALLGNSTG VHDPKGYIYHNMLDAQIDAVRSAIDAIGFGNLSMKITVSESGWPSKGDSEDTAATPNNAKTYNTRLIERAQSNKGTPMKPKDNIEIFVFALFNENKKPGG ASERNFGIFNGDGSKVYEVD |
Full Sequence |
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Protein Sequence Length: 457 Download |
MALHLFHLLL FLLLSPLSYV SSVGINYGTL GNNLPSPKKV AQLLQSTLID KVKIYDTNPD 60 ILEAFSNTGI DLIVAVENYH VANISKDAAA ADDWFATRVQ PFIPATSIVA VCVGNEYLTS 120 DDNLDPDALV QAMQNLHAVL LKRGLDRKIK VTTPHSMAVL ASSFPPSAST FATKLIPTMS 180 SIVGFLADTG APFMVNAYPY FAYRDNPSTV DLEYALLGNS TGVHDPKGYI YHNMLDAQID 240 AVRSAIDAIG FGNLSMKITV SESGWPSKGD SEDTAATPNN AKTYNTRLIE RAQSNKGTPM 300 KPKDNIEIFV FALFNENKKP GGASERNFGI FNGDGSKVYE VDLSCEFCSN GGAFEKMSTS 360 GQVRGPSVWC VAKPHADEKV LQTVLDFCCG PGGVDCREVY ESGKCFEPDK LHAHASYAMN 420 AYYQMHGRNY WNCDFKGTGL VTFSDPSYGT CRYRQQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 15 | 334 | 332 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-17 | 369 | 439 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-35 | 369 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-90 | 23 | 342 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40742.1 | 0 | 20 | 456 | 46 | 485 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001761806.1 | 0 | 22 | 447 | 33 | 451 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002272900.1 | 0 | 20 | 456 | 21 | 460 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300634.1 | 0 | 15 | 343 | 12 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510704.1 | 0 | 20 | 456 | 20 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 23 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 23 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 0 | 23 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 0 | 23 | 343 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |