Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.006G090600.1 |
Family | CBM43 |
Protein Properties | Length: 449 Molecular Weight: 48359.8 Isoelectric Point: 4.5208 |
Chromosome | Chromosome/Scaffold: 06 Start: 32694870 End: 32698707 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 360 | 441 | 4.6e-33 |
WCVPKAGISDAQLQSSLDYACGQGIDCSPIQPGGACFEPNIVASHAAYAMNLYYQNSAKNPWNCDFSQTATLTSQNPSYNNC | |||
GH17 | 24 | 341 | 0 |
IGVNYGQEADNLPPPLATVELLKSTSIEKVRLYGADPVIIKALANTEIGIVIGAANGDIPCLASDPNSAVQWVNSNVLPFYPDSKIILVTVGNEVLTTND PNLIDQLLPAMQNMQNAITGALLGGKIKVSTVHSMAVLGQSDPPSSGCFSPSYEPALRGLLRFHSDNGSPFAVNPYPFFAYQSDPRPETLAFCLFQPNEG RVDRVSGIKYMNMFDAQVDAVHSALSDMGFKDVEIMVAETGWPYRGDNNEVGPSIENAKAYNGNLIAHLKSMVGTPLMPGKSVDTYLFALYDEDLKVGPG SKRAFGLYKPDLSMTYDV |
Full Sequence |
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Protein Sequence Length: 449 Download |
MATFFFFFLS FLIFFHSSSA EPFIGVNYGQ EADNLPPPLA TVELLKSTSI EKVRLYGADP 60 VIIKALANTE IGIVIGAANG DIPCLASDPN SAVQWVNSNV LPFYPDSKII LVTVGNEVLT 120 TNDPNLIDQL LPAMQNMQNA ITGALLGGKI KVSTVHSMAV LGQSDPPSSG CFSPSYEPAL 180 RGLLRFHSDN GSPFAVNPYP FFAYQSDPRP ETLAFCLFQP NEGRVDRVSG IKYMNMFDAQ 240 VDAVHSALSD MGFKDVEIMV AETGWPYRGD NNEVGPSIEN AKAYNGNLIA HLKSMVGTPL 300 MPGKSVDTYL FALYDEDLKV GPGSKRAFGL YKPDLSMTYD VGISNCYPTP STLKPTATIW 360 CVPKAGISDA QLQSSLDYAC GQGIDCSPIQ PGGACFEPNI VASHAAYAMN LYYQNSAKNP 420 WNCDFSQTAT LTSQNPSYNN CIYPGGST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-6 | 39 | 320 | 288 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-23 | 360 | 430 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-40 | 360 | 443 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-92 | 24 | 341 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 1 | 447 | 1 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 1 | 448 | 1 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 5 | 445 | 40 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 1 | 448 | 1 | 465 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 15 | 448 | 19 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 341 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 24 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 24 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 24 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 24 | 344 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |