Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.013G263800.1 |
Family | CBM43 |
Protein Properties | Length: 511 Molecular Weight: 54861.5 Isoelectric Point: 8.6407 |
Chromosome | Chromosome/Scaffold: 13 Start: 57734440 End: 57739206 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 384 | 466 | 8.1e-33 |
WCVAKSNASNAALQANIDYVCSSGVDCKPIQSAGACFNPNNVRSHASYAMNAYYQANGRHDFNCDFNRTGVITSTDPSHAACN | |||
GH17 | 32 | 344 | 0 |
IGVNYGTIADNLPTPAQVANFLKTKTNIDRIKIFDTNPDILKAFAGTGISVTVTVGNGDIPSLAKLPGAKAWIEKNILPYHPKTIIRYIAVGNEILATSD KTLIAHLLPAMKALRSALDSANATSVKVSTPHSLGILSTSEPPSAGKFRKGYDKLIFAPILEFHKQTKSPFMVNPYPYFGFKPQTLDYALFKPNGGVFDA GTGINYTNMFDAQLDAVYTAMKRVGYEDVDLVVAETGWPSVGDPGQPGVSLENALSYNGNLIKHVDSGKGTPLMPNRTFETYIFALFNENLKESVPERNF GLFKPDLNPVYDV |
Full Sequence |
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Protein Sequence Length: 511 Download |
MAVLSATKLL IFFFFSCHLS IFSSTATAVY TIGVNYGTIA DNLPTPAQVA NFLKTKTNID 60 RIKIFDTNPD ILKAFAGTGI SVTVTVGNGD IPSLAKLPGA KAWIEKNILP YHPKTIIRYI 120 AVGNEILATS DKTLIAHLLP AMKALRSALD SANATSVKVS TPHSLGILST SEPPSAGKFR 180 KGYDKLIFAP ILEFHKQTKS PFMVNPYPYF GFKPQTLDYA LFKPNGGVFD AGTGINYTNM 240 FDAQLDAVYT AMKRVGYEDV DLVVAETGWP SVGDPGQPGV SLENALSYNG NLIKHVDSGK 300 GTPLMPNRTF ETYIFALFNE NLKESVPERN FGLFKPDLNP VYDVGILRSE QGMGPTSAPT 360 TATAPSAAMA PSAGKAPSNG SGKWCVAKSN ASNAALQANI DYVCSSGVDC KPIQSAGACF 420 NPNNVRSHAS YAMNAYYQAN GRHDFNCDFN RTGVITSTDP SHAACNYSVN QGSGLKLESS 480 VAANTMRFSA VWHVISLATL SYCMIFIRFY * |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG5309 | COG5309 | 0.001 | 23 | 337 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
pfam07983 | X8 | 1.0e-23 | 383 | 454 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. |
smart00768 | X8 | 4.0e-42 | 383 | 467 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
pfam00332 | Glyco_hydro_17 | 3.0e-94 | 32 | 344 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002283647.1 | 0 | 1 | 467 | 1 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002283660.1 | 0 | 1 | 467 | 1 | 404 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 24 | 461 | 19 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002530862.1 | 0 | 26 | 463 | 22 | 441 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002532848.1 | 0 | 25 | 507 | 18 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 337 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 337 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 32 | 337 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 32 | 337 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |