Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si026317m |
Family | CBM43 |
Protein Properties | Length: 474 Molecular Weight: 49949.5 Isoelectric Point: 7.1328 |
Chromosome | Chromosome/Scaffold: 8 Start: 40376712 End: 40380820 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 389 | 470 | 8.1e-34 |
WCVAKTGADVTTLQNNINYACGYVDCKPIQSGGGCFDPNNVQSHASFVMNAYYQANGRHDYDCDFKGTGMVTSSDPSYGSCK | |||
GH17 | 30 | 352 | 0 |
IGVNYGANADNLPSPAAVATFLATKTTINRVKLFDANPAFLDAFAANAPSISIAVSIPNSALPSFADKATGLDAARGWVRDNLAAHVANGANVTLLLAGN EILGPVVVPDLVVALLPAMRRLSQALQLEKLPQVRVTTPHYLGILAPSDGIPSNARFRPGFDNKVLAPMLKFHNDTGSPLMVNAYPYFSYNAQNLNYAIF RPNAGIYDPATKLNYTSMFDAQMDAIYTAMKKLGYGDVQIAVGEAGWPTQAEAGQVGVGPEEARDFNAGMIRVCSGGKGTPAMPGRTFETYIFSLFDENQ KPGPIAERNFGIFNTDFTPKYDI |
Full Sequence |
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Protein Sequence Length: 474 Download |
MLPLLLHLLL AAAASHGAAA QGGGLPSFPI GVNYGANADN LPSPAAVATF LATKTTINRV 60 KLFDANPAFL DAFAANAPSI SIAVSIPNSA LPSFADKATG LDAARGWVRD NLAAHVANGA 120 NVTLLLAGNE ILGPVVVPDL VVALLPAMRR LSQALQLEKL PQVRVTTPHY LGILAPSDGI 180 PSNARFRPGF DNKVLAPMLK FHNDTGSPLM VNAYPYFSYN AQNLNYAIFR PNAGIYDPAT 240 KLNYTSMFDA QMDAIYTAMK KLGYGDVQIA VGEAGWPTQA EAGQVGVGPE EARDFNAGMI 300 RVCSGGKGTP AMPGRTFETY IFSLFDENQK PGPIAERNFG IFNTDFTPKY DIGLLRQGSS 360 ASPNPSPNPS PKPSPNPSPN PSPSGGGKWC VAKTGADVTT LQNNINYACG YVDCKPIQSG 420 GGCFDPNNVQ SHASFVMNAY YQANGRHDYD CDFKGTGMVT SSDPSYGSCK YVS* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-23 | 388 | 458 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-41 | 388 | 471 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-68 | 30 | 352 | 328 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX95270.1 | 0 | 25 | 473 | 31 | 472 | glucan endo-1,3-beta-glucosidase precursor (ec 3.2.1.39) ((1-3)-beta-glucan endohydrolase) ((1-3)-beta-glucanase) (beta-1,3-endoglucanase) [Oryza sativa Japonica Group] |
GenBank | ACF79258.1 | 0 | 16 | 471 | 12 | 457 | unknown [Zea mays] |
GenBank | ACG36515.1 | 0 | 23 | 471 | 20 | 458 | glucan endo-1,3-beta-glucosidase precursor [Zea mays] |
RefSeq | NP_001141385.1 | 0 | 16 | 471 | 12 | 457 | hypothetical protein LOC100273476 [Zea mays] |
RefSeq | XP_002451320.1 | 0 | 16 | 473 | 15 | 467 | hypothetical protein SORBIDRAFT_05g027690 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 8.40779e-45 | 30 | 352 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 8.40779e-45 | 30 | 352 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 2.00386e-43 | 29 | 354 | 2 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 2.00386e-43 | 29 | 354 | 2 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur7_B | 2.00386e-43 | 29 | 354 | 2 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |