Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0274 RT-qPCR xylobiose, xylooligosaccharide Bifidobacterium animalis subsp. lactis 23663691
Transcriptional analysis of oligosaccharide utilization by Bifidobacterium lactis Bl-04. BMC Genomics. 2013 May 10;14:312. doi: 10.1186/1471-2164-14-312.
2013 May 10 degradation 12 4 GH43, GH43_12, GH43_11, GH43, GH43_10
PUL0294 gene trait matching exercise xylooligosaccharide Bifidobacterium longum 29310579
Gene-trait matching across the Bifidobacterium longum pan-genome reveals considerable diversity in carbohydrate catabolism among human infant strains. BMC Genomics. 2018 Jan 8;19(1):33. doi: 10.1186/s12864-017-4388-9.
2018 Jan 8 degradation 12 2 GH120, GH43, GH43_12, GH43_11, GH43
PUL0346 gene deletion mutant and growth assay xylooligosaccharide uncultured bacterium 27573446
Functional characterization of a gene locus from an uncultured gut Bacteroides conferring xylo-oligosaccharides utilization to Escherichia coli. Mol Microbiol. 2016 Nov;102(4):579-592. doi: 10.1111/mmi.13480. Epub 2016 Sep 14.
2016 Nov degradation 15 5 GH43, GH43_29, GH43, GH43_12, GH43, GH43_1, GH10, GH16
PUL0457 high performance anion exchange chromatography, enzyme activity assay, RNA-Seq xylooligosaccharide Lactobacillus rossiae 27142164
Cloning, expression and characterization of a beta-D-xylosidase from Lactobacillus rossiae DSM 15814(T). Microb Cell Fact. 2016 May 3;15:72. doi: 10.1186/s12934-016-0473-z.
2016 May 3 degradation 7 1 GH43_11, GH43