| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s318_61V6.1 |
| Family | CE8 |
| Protein Properties | Length: 396 Molecular Weight: 44097.9 Isoelectric Point: 8.8951 |
| Chromosome | Chromosome/Scaffold: 318 Start: 359134 End: 360500 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 113 | 379 | 0 |
| DVVVEQDGSGKLRTIQEAVDAYNENSIRRVIYIRAGVYKQQVTAQDVITGSRNVALEQGTTTVRSATLIVLGRGFIGRSFKVENTAGPLGYQAVAFRGTT LCTRIHSAGTTVGAPFYGTVDFVFGNAAVCFQSCQFIAKMTTLPRKQNTYTEQGRTDAHQNTGFSFQNCIFDGMDHLKLNTALHKSYLGRPWKQFFVCVI MKSEVKDHIDPQGWLPWNKTSFGLFTSFFAEFENFGPGSSTVNRVPWSRQIWSAATAIRYHASSFVQ | |||
| Full Sequence |
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| Protein Sequence Length: 396 Download |
| MELQKTSIDS IKEISLTDEF RLQESSRHSY ELLSHALAIL NALAVYGEHF LLWRPTAFSL 60 PDGVNASLIP SLPGTPGHRH QKLVFATSGD NPSPPDWIDA QTRRHLLNNP TYDVVVEQDG 120 SGKLRTIQEA VDAYNENSIR RVIYIRAGVY KQQVTAQDVI TGSRNVALEQ GTTTVRSATL 180 IVLGRGFIGR SFKVENTAGP LGYQAVAFRG TTLCTRIHSA GTTVGAPFYG TVDFVFGNAA 240 VCFQSCQFIA KMTTLPRKQN TYTEQGRTDA HQNTGFSFQN CIFDGMDHLK LNTALHKSYL 300 GRPWKQFFVC VIMKSEVKDH IDPQGWLPWN KTSFGLFTSF FAEFENFGPG SSTVNRVPWS 360 RQIWSAATAI RYHASSFVQP RQWVADHNIP LTTTL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-68 | 4 | 390 | 424 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-70 | 83 | 395 | 349 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 1.0e-71 | 1 | 379 | 416 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-71 | 4 | 395 | 439 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 3.0e-90 | 113 | 379 | 307 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001758305.1 | 0 | 1 | 390 | 104 | 493 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767596.1 | 0 | 1 | 395 | 120 | 532 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767671.1 | 0 | 101 | 395 | 2 | 331 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772362.1 | 0 | 95 | 392 | 17 | 346 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783825.1 | 0 | 85 | 392 | 119 | 461 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 113 | 384 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 113 | 395 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| FC368629 | 278 | 138 | 377 | 0 |
| FC334402 | 208 | 196 | 388 | 0 |
| BJ599372 | 168 | 229 | 396 | 0 |
| BU052723 | 207 | 21 | 211 | 0 |
| BJ599745 | 163 | 230 | 392 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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