| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s32_31V6.1 |
| Family | CE8 |
| Protein Properties | Length: 570 Molecular Weight: 61727.6 Isoelectric Point: 7.1407 |
| Chromosome | Chromosome/Scaffold: 32 Start: 215655 End: 217929 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 258 | 552 | 0 |
| DVVVAQDGSGDFKTIQEAVNAHKENSARLVIYIKSGTYNEQVTVPKTAKYLTFIGDGDKTIITGSRNVALMKGMTTFKSATLIVSGDGFIGRSFKVENTA GAEGHQAVAFRGTARLIAMYQVTFDSYQDTLYAHSFRQYYRDCTVYGTVDFIFGNAEASFQNCKIIAKRSTLLGQQNTYTAQGRTDPQMTTGFSFQNCVF DGTPELKANTTFYKTFLGRPWKAYSVCVLLKSEVLAHVDPSGWMPWNTTTFGLYTSYFAEYQSFGAGADTSKRVSWSHQITSASTAQTYQANNFV | |||
| Full Sequence |
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| Protein Sequence Length: 570 Download |
| MGKCCCLVFI AILALVIAGV SIGVPLANKA KAKANDSEQS AADNVCQATS YPATCAQTLA 60 SGNYTADSKG VTRYSLQSAE TGVNSTLSSI LRLNRTNPNV TAALEVCDEV LELSKEQLEA 120 AISVLGGSNS TATKKVMDDL KSWVSAAMEL HTTCIDALLE VSPEDGKRIE QDSAHTQELL 180 SNALAFINAL ATYGDKIQNW KLTGFSIPSG INISDLTGVE IPPVPGFRNR RLLSTTDSLP 240 GWMDAQTKRH LLQAPTYDVV VAQDGSGDFK TIQEAVNAHK ENSARLVIYI KSGTYNEQVT 300 VPKTAKYLTF IGDGDKTIIT GSRNVALMKG MTTFKSATLI VSGDGFIGRS FKVENTAGAE 360 GHQAVAFRGT ARLIAMYQVT FDSYQDTLYA HSFRQYYRDC TVYGTVDFIF GNAEASFQNC 420 KIIAKRSTLL GQQNTYTAQG RTDPQMTTGF SFQNCVFDGT PELKANTTFY KTFLGRPWKA 480 YSVCVLLKSE VLAHVDPSGW MPWNTTTFGL YTSYFAEYQS FGAGADTSKR VSWSHQITSA 540 STAQTYQANN FVGASSWVPS YNLPLTTTL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 3.0e-114 | 7 | 569 | 586 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 3.0e-118 | 12 | 564 | 569 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-125 | 8 | 569 | 589 | + pectinesterase | ||
| PLN02745 | PLN02745 | 3.0e-126 | 10 | 565 | 595 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-142 | 258 | 555 | 302 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001758305.1 | 0 | 45 | 564 | 1 | 493 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767596.1 | 0 | 29 | 569 | 3 | 532 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767671.1 | 0 | 246 | 569 | 2 | 331 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772362.1 | 0 | 239 | 566 | 16 | 346 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783825.1 | 0 | 105 | 566 | 23 | 461 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 258 | 569 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 258 | 560 | 4 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-20 | 254 | 564 | 1 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-20 | 254 | 564 | 1 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-20 | 254 | 564 | 1 | 342 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 5 | 27 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 18 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BJ175055 | 223 | 33 | 255 | 0 |
| FC334402 | 216 | 355 | 570 | 0 |
| BU052723 | 216 | 168 | 383 | 0 |
| FC368629 | 270 | 283 | 551 | 0 |
| BQ827430 | 152 | 419 | 570 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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