| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s95_94V6.1 |
| Family | CE8 |
| Protein Properties | Length: 574 Molecular Weight: 62616.9 Isoelectric Point: 6.1236 |
| Chromosome | Chromosome/Scaffold: 95 Start: 990174 End: 992746 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 262 | 557 | 0 |
| DVVVAQDGSGNFRTIQAAVDAHKTNTKRLVIYIKAGIYNEQVIVPKKAKFLTLIGDGDRTVLTGDRNVALMKGMTTFKSATLIVSGAGFVGRSFRVQNTA GAEGHQAVAFRGSADNIAFYQVTFDSFQDTLYCHSFRQFYRDCTVFGTVDFIFGNAAAAFQNCKIIAKKSTILGQQNTYTAQGRTDPNQATGLSFQNCVI DGTSDLMASVAQYKSYLGRPWKAYSVCVIMKSEIKGHVDPTGWLPWNTTNFGLYTSYFAEYKNFGLGSAIDNRVQWSHQVGNDKQANYYQANNFIQ | |||
| Full Sequence |
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| Protein Sequence Length: 574 Download |
| MGKCCCLVLV TIVAVLVLGL AIGIPVGMKK AKEKVKNWDP TAVNSACQST RYPDTCNETF 60 TGDYPRDTNG VMRHSVQSSE KGVNDTLGFM SEFDSSDPVI SGAVEVCNEV LVSAREELEA 120 ASTALETKDT LGVDTLKDIQ AWVSAAMELH TTCIDAFMEV NNVTGSALAK KSAKTDELLS 180 NSLAFINALA QYGNDLLAWR PTGISLPEGF NFTLPNVTLP NIPGFGNRKL LSVEELEMDE 240 GFPGWMDVET RRHLLQAPPK YDVVVAQDGS GNFRTIQAAV DAHKTNTKRL VIYIKAGIYN 300 EQVIVPKKAK FLTLIGDGDR TVLTGDRNVA LMKGMTTFKS ATLIVSGAGF VGRSFRVQNT 360 AGAEGHQAVA FRGSADNIAF YQVTFDSFQD TLYCHSFRQF YRDCTVFGTV DFIFGNAAAA 420 FQNCKIIAKK STILGQQNTY TAQGRTDPNQ ATGLSFQNCV IDGTSDLMAS VAQYKSYLGR 480 PWKAYSVCVI MKSEIKGHVD PTGWLPWNTT NFGLYTSYFA EYKNFGLGSA IDNRVQWSHQ 540 VGNDKQANYY QANNFIQASE WVSGLDVPLT TAL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 1.0e-120 | 29 | 573 | 563 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 3.0e-121 | 39 | 573 | 558 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 3.0e-124 | 42 | 573 | 556 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 3.0e-124 | 41 | 573 | 555 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 3.0e-143 | 262 | 559 | 302 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001758305.1 | 0 | 47 | 568 | 2 | 493 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767596.1 | 0 | 28 | 573 | 1 | 532 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001767671.1 | 0 | 248 | 573 | 1 | 331 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772362.1 | 0 | 232 | 572 | 6 | 348 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783825.1 | 0 | 77 | 570 | 3 | 461 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 262 | 573 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 262 | 573 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-20 | 261 | 552 | 4 | 331 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-20 | 261 | 552 | 4 | 331 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 4e-20 | 261 | 552 | 4 | 331 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 5 | 27 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 21 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BJ599372 | 194 | 381 | 574 | 0 |
| FC368629 | 268 | 289 | 555 | 0 |
| CJ972227 | 199 | 1 | 199 | 0 |
| FC334402 | 204 | 359 | 562 | 0 |
| BU052723 | 219 | 170 | 387 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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